10 homologs were found in PanDaTox collection
for query gene Avi_5081 on replicon NC_011988
Organism: Agrobacterium vitis S4



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011988  Avi_5081  hypothetical protein  100 
 
 
298 aa  612  9.999999999999999e-175  Agrobacterium vitis S4  Bacteria  normal  0.149951  n/a   
 
 
-
 
NC_012853  Rleg_5523  Acetoacetate decarboxylase  82.83 
 
 
297 aa  520  1e-146  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.00101923 
 
 
-
 
NC_011988  Avi_5319  hypothetical protein  69.15 
 
 
296 aa  433  1e-120  Agrobacterium vitis S4  Bacteria  normal  0.519767  n/a   
 
 
-
 
NC_009511  Swit_1679  hypothetical protein  37.26 
 
 
272 aa  162  4.0000000000000004e-39  Sphingomonas wittichii RW1  Bacteria  normal  0.668619  normal 
 
 
-
 
BN001306  ANIA_03392  salicylate hydroxylase, putative (AFU_orthologue; AFUA_1G17670)  28.76 
 
 
710 aa  95.9  7e-19  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.39217 
 
 
-
 
NC_009051  Memar_1128  hypothetical protein  25.45 
 
 
264 aa  92.8  6e-18  Methanoculleus marisnigri JR1  Archaea  normal  0.219472  n/a   
 
 
-
 
BN001301  ANIA_06742  salicylate hydroxylase, putative (AFU_orthologue; AFUA_7G00590)  27.74 
 
 
697 aa  89.7  6e-17  Aspergillus nidulans FGSC A4  Eukaryota  normal  decreased coverage  0.00748094 
 
 
-
 
NC_009921  Franean1_3019  hypothetical protein  40 
 
 
181 aa  84.3  0.000000000000002  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_2366  hypothetical protein  24.23 
 
 
268 aa  82.4  0.000000000000009  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.138399 
 
 
-
 
NC_009511  Swit_1994  hypothetical protein  24.53 
 
 
271 aa  76.6  0.0000000000005  Sphingomonas wittichii RW1  Bacteria  normal  0.58377  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>