Gene Franean1_3019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3019 
Symbol 
ID5671401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3554681 
End bp3555226 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content69% 
IMG OID641241921 
Producthypothetical protein 
Protein accessionYP_001507341 
Protein GI158314833 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG AACCTCGCCG TCTGCTGTCC CGGCGCGCGC CGACCCCTGC GGCGACGATC 
CGGCGGATGA ACCCCGGCAG CACCTACGAC GGCATACCCC GGATGCCTGC ACTCTTCGGC
CGACAGGGCG GTCCCCGCCA ACGTCCGGAA GGGCCGGGCA TGTACCGGGC CGGCGATGGG
AACACCCTCG TCACCTGGGT CGCCGCGAGG GCGGACGCCG ACAGGTTGGC AGCTCTCCTG
CCAGCTGGGT TCGAGCTCAC CGACCCGCTC CTGATCGTCG AGGCCGCGAC GCTGTCCAAC
CTTCCGTGGC TCGCCGGGCG CGGCTATGAG TTCTTGGTGG TCAGCACTCC GGTGGTCTAC
ACGACTGCCG GAGCCGAGCA CCGCGGCCGG CTTGAGCTGG TCACCTGGGA GGACTGCCCG
GACGCCATCA TCTCCGGGCG CGAAGAACTC GGGTTCAACA AGATGTATGC CGACACCATG
AGCCGCCACA CCGGCAACGA CGGGAAGTCG GTCCGCTACC GCGCGGCGTG GGACGGCACC
ACGTGA
 
Protein sequence
MKIEPRRLLS RRAPTPAATI RRMNPGSTYD GIPRMPALFG RQGGPRQRPE GPGMYRAGDG 
NTLVTWVAAR ADADRLAALL PAGFELTDPL LIVEAATLSN LPWLAGRGYE FLVVSTPVVY
TTAGAEHRGR LELVTWEDCP DAIISGREEL GFNKMYADTM SRHTGNDGKS VRYRAAWDGT
T