Gene Rleg_5523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5523 
Symbol 
ID8016414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp109113 
End bp110006 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content63% 
IMG OID644827690 
ProductAcetoacetate decarboxylase 
Protein accessionYP_002978890 
Protein GI241518262 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4689] Acetoacetate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00101923 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCTTCA CACTGCACCC CGACCATCGT TACCGAATGC CTGTCGTCTT TGGGCCGGCG 
GTAGGTCCCC GCCAAAAGCC CGGCGGCGGC ATGTGGTCGC GGGAAGAAAC CGGCACGATG
AATGCGGAGT GGATGGCGAT CACCTACCGC ACCGATCCCG CGAAGCTGGC AGCCCTTCTG
CCGCCCGGCA TGAGCTTGAG AGGCGAGCCA CTGCTCAGTG TGTCTTGTGC CTGGTTCAAG
AACCTCTATT GGCTCGCCGG TCGTGGCTAC GGCATCCTGT CGGTCGACTT TCCGGTGACC
TATCAGGGAA AGACCGAGAC GCTTGACGGC TCTTTCTGCC CGGTAATCTG GGAGGGCCAA
CCCGAGGCGA TTTTGACCGG TCGCGACGAG ATGGGCTTCC CGAAACTCTT TTGCGACATG
CCGGAAATTG CCTGGGAACG CGATAAGGGA ACGGCCTCTT GCGAGACGTC GTGGTTCGGC
TTCAAATTCT TCGATATCGC GCTCACTGGG ATGATCGAGG AAGATGCGCC ACCCAGCCTG
CCCGGTTCTG GCGGCGGCGC GGCCATGTAC TACAAGTATG TGCCCCGTAC GAGCCCGCGG
AAGGGAGCCG GCGCAGATGT CGCCTACGTC ACCACGCCGG CGCTGCGGCC GGGCGAGGGG
CGGCCCGACG CCATCAGTTT TGAAGGCTAC GACTTCAAGC GGTGGAGAGC CAACGGCAGC
TTCAATTGGC ATCGCGCCAC GTTCGAACAG CTCCCGACGA CCTTCCATAT CGTCAATGCC
ATTGCCGACC TCCCATGCGT CGATATCGTG AGGACCGAGA TGGTCGCCTT CTCGGGGCCT
GGCATCGGTG TGTCGGTCAA CAGCATCCGG CCCGTGGAAC CGGCGCCAGA GTGA
 
Protein sequence
MGFTLHPDHR YRMPVVFGPA VGPRQKPGGG MWSREETGTM NAEWMAITYR TDPAKLAALL 
PPGMSLRGEP LLSVSCAWFK NLYWLAGRGY GILSVDFPVT YQGKTETLDG SFCPVIWEGQ
PEAILTGRDE MGFPKLFCDM PEIAWERDKG TASCETSWFG FKFFDIALTG MIEEDAPPSL
PGSGGGAAMY YKYVPRTSPR KGAGADVAYV TTPALRPGEG RPDAISFEGY DFKRWRANGS
FNWHRATFEQ LPTTFHIVNA IADLPCVDIV RTEMVAFSGP GIGVSVNSIR PVEPAPE