| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1679 |
|---|
| Symbol | |
|---|
| ID | 5196550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 1871036 |
|---|
| End bp | 1871854 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640581227 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001262180 |
|---|
| Protein GI | 148554598 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.668619 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAA CGGATCAGAA TCGACGCTAT CGGATGCCCG TGGTCTTCGG TCCGACATGC
GGTCCCCGCC AGGGTCCGGA CGGCCGCCGC TACGACTATG CGGACGCCCC GCGGACGACG
GCGGCGATCT CCTTCCTGAC GCGCCGGGAC GCCCTGCTCG ACCTGATGCC GCCACATTGC
CGGCCCGATG GCGATCCCGT CGTCACCGTC GAGCATGTCG AGCTGCGCGA ACTCGAATGG
CTGGCCGGGC GAAGCTACAG CCTTCTCTCG ATCAAGCTGC CGGTGGTGTA CGAGGGGCCC
GAGGAGCAAG TGCGCGGCGC CTTCCTGCCG GTGCTCTGGG AGAACCGGGC CGAGCCGATC
ATCAGCGGCC GCGAGGAACT GGGCTTCGCC AAGCTGTTCT GCGATCTGCC GCCGCCCCGG
GTCCTGGCCG GCAAGCGCGA ATATTCCGCC CTGTGGGACG GCCATGGCTT CATCCGCATG
GAATTCGACG ACCTCGCCGA AGGGCCGCCG CCCGGCCCGC CGCCGCCCGA TTTCGCGGGC
GTGCTCCATC ATCGCTATTT CCCCGCGGTT TCCCGCGAAG GCGTCGCCGA CGTCGAGCAG
ATGGTGCTCA CACCGGCGGG CGGGGCGACG ATCCGCTACG ACCGCATATG GCGTGGCCAG
GGCCGGGTGA CCTTCGTCCG GTCGAGCTGG GAGCAGCTTC CCACCATGTT CCACATCGTC
AACCGCCTCG CCGAGCTGCC GGTCGTCGAA TGGCGCGGCG CGTCGATCAT CGAATCCCGC
GGGACCAAGG ACCTGTCGGA CCAGCGCGTG CTGCGCTGA
|
|---|
| Protein sequence | MAETDQNRRY RMPVVFGPTC GPRQGPDGRR YDYADAPRTT AAISFLTRRD ALLDLMPPHC
RPDGDPVVTV EHVELRELEW LAGRSYSLLS IKLPVVYEGP EEQVRGAFLP VLWENRAEPI
ISGREELGFA KLFCDLPPPR VLAGKREYSA LWDGHGFIRM EFDDLAEGPP PGPPPPDFAG
VLHHRYFPAV SREGVADVEQ MVLTPAGGAT IRYDRIWRGQ GRVTFVRSSW EQLPTMFHIV
NRLAELPVVE WRGASIIESR GTKDLSDQRV LR
|
|---|
| |