| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5319 |
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| Symbol | |
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| ID | 7380681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 318061 |
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| End bp | 318951 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643648943 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547180 |
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| Protein GI | 222106389 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4689] Acetoacetate decarboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.519767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTA CATTAAATCC TGCATTCCGA TATCGAATGC CACTGTCCTT CGGACCAGCT
CCTGGACCGC GCCAAAAGCC CGGCGGCGGC ATGTGGGCGG CCGAGGAGAC AGGTCGAATG
AACGCCGAGT GGATGGCCGT TACCTACAGA ACCTTGCCTG AAAAGCTGGA GGCATTGCTT
CCGCCAGGCA TGGAACTGCG CGGCGAGCCT CTGGTGACGG TTTCTTGCGC CTGGTTCAAA
AATCTCTACT GGCTTGCGGG CCGCGGCTAC GGGATTGTCG TTGTGGATTT TCCCGTCACC
TATCGCGGCA AGACCGAGAC GCTTGAAGGC ACCTTCTGCC CCGTCCTGTG GGAAGGCGCG
CCTGACGCCA TCATGACCGG GCGCGATGAG CTTGGTTTTC CCAAAATGTT TGCCGACATT
CCGGAAATCG AGCACGACAA GGCACAAGGC ACCGCCGCCT GCTCTGCGTC CTGGATGGGC
TTCAAATTCT TCGATATCGC CCTGACGGAT CTGGTTGAGG CTGGCAATGA GCCAGCACTT
CCCGGTGCCG ATAATGGCCC GTCGATGTAT TATAAATATG TACCACGCAC CAGTCCCGGC
GGACGCGAGG GTGCCGATAT TGCTTATGTC ACCACCGCAG CAGCACCGCC CGAGACTGGC
GGCAGGGTCA GCAATATTAA TTTCGATGGC TTTGATTTCA AACGCTGGAC GGCAAAAGGC
AGCGTGGCGT GGCACCGGGC GACATTCGAA CAATTGCCGC TCAGCGCCCA TGTCGTCAAT
GGAATGGCCG ATCTGGATAT TCTTGAGGTC ACGAAAGTAC AGATGGTAGC CTTTTCCGGC
CCCGGTATCG CAGTTTCAGT CAATTCAATG CGCGCAGTCG ATCCGTCTTA G
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| Protein sequence | MSFTLNPAFR YRMPLSFGPA PGPRQKPGGG MWAAEETGRM NAEWMAVTYR TLPEKLEALL
PPGMELRGEP LVTVSCAWFK NLYWLAGRGY GIVVVDFPVT YRGKTETLEG TFCPVLWEGA
PDAIMTGRDE LGFPKMFADI PEIEHDKAQG TAACSASWMG FKFFDIALTD LVEAGNEPAL
PGADNGPSMY YKYVPRTSPG GREGADIAYV TTAAAPPETG GRVSNINFDG FDFKRWTAKG
SVAWHRATFE QLPLSAHVVN GMADLDILEV TKVQMVAFSG PGIAVSVNSM RAVDPS
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