16 homologs were found in PanDaTox collection
for query gene Plim_0089 on replicon NC_014148
Organism: Planctomyces limnophilus DSM 3776



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014148  Plim_0089  NIPSNAP family containing protein  100 
 
 
184 aa  379  1e-104  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.348759  n/a   
 
 
-
 
NC_013730  Slin_0395  NIPSNAP family containing protein  50 
 
 
262 aa  120  9.999999999999999e-27  Spirosoma linguale DSM 74  Bacteria  normal  0.865859  normal 
 
 
-
 
NC_012850  Rleg_0760  NIPSNAP family containing protein  43.93 
 
 
108 aa  91.7  5e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.302286  normal 
 
 
-
 
NC_008786  Veis_2970  NIPSNAP family protein  40.19 
 
 
108 aa  84  0.000000000000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4475  hypothetical protein  41.12 
 
 
108 aa  82.8  0.000000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2786  NIPSNAP  39.25 
 
 
108 aa  80.9  0.000000000000009  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0225212  normal  0.675338 
 
 
-
 
NC_010505  Mrad2831_3255  NIPSNAP family protein  39.25 
 
 
108 aa  79.7  0.00000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3225  NIPSNAP family containing protein  38.32 
 
 
108 aa  80.1  0.00000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.990074  n/a   
 
 
-
 
NC_007952  Bxe_B0973  hypothetical protein  36.45 
 
 
108 aa  73.9  0.000000000001  Burkholderia xenovorans LB400  Bacteria  normal  0.155392  normal  0.712944 
 
 
-
 
NC_009468  Acry_3412  NIPSNAP family protein  37.38 
 
 
108 aa  73.9  0.000000000001  Acidiphilium cryptum JF-5  Bacteria  normal  0.870754  n/a   
 
 
-
 
NC_009484  Acry_1821  NIPSNAP family protein  36.45 
 
 
108 aa  73.2  0.000000000002  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_5794  NIPSNAP family protein  37.38 
 
 
108 aa  71.2  0.000000000007  Burkholderia phymatum STM815  Bacteria  normal  0.0486998  normal  0.119522 
 
 
-
 
NC_009485  BBta_5103  hypothetical protein  27.36 
 
 
117 aa  48.1  0.00007  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_4035  NIPSNAP family containing protein  32.2 
 
 
264 aa  44.7  0.0008  Spirosoma linguale DSM 74  Bacteria  decreased coverage  0.00000172271  normal 
 
 
-
 
NC_013132  Cpin_6516  NIPSNAP family containing protein  28.95 
 
 
270 aa  44.3  0.0009  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.732065  normal  0.0663973 
 
 
-
 
NC_013037  Dfer_3687  NIPSNAP family containing protein  28.18 
 
 
262 aa  41.2  0.009  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.211147 
 
 
-
 
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