Gene Dfer_3687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3687 
Symbol 
ID8227272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4486407 
End bp4487195 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content49% 
IMG OID644931519 
ProductNIPSNAP family containing protein 
Protein accessionYP_003088057 
Protein GI255037436 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.211147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAATT ACCGAAACCT GAATTTACTT TTCACCTTTT TGCTACTGAT GGTTGCATTG 
AGCACAGTAG CAGCTCCTCC CAAGCGGGAA TTTTACGAAA TCAAAATCTA TCACCTCAAA
AATGCCGATC AGGAAGCGCG CGTAGAAGCA TTCCTGAAAG ACGCCTACGT TCCTGCCGCC
CACCGCGCGG GAATCAAAAA TGTGGGGGTA TTTAAGCCGG TGAAGACCGA TACAATGGCC
GGAAAGCTGA TTTACGTGCT TACGCCTTTG AAATCGCTCG ACCAGCTGCT TACACTGCCC
AAAACGCTGG ACAAAGATGC GGCCTACACT TCGGCGGGGA AGGATTACAT TGATGCCAAC
TACAAAAATG CCCCCTACGC CCGTTTTGAG TCGATTATCC TGCAAGCATT TACTGATGCT
CCCGTGCTTA CGAAGCCAGC GCTGACCGGC CCAAAAAGCG AGCGCGTGTA CGAGTTGCGC
AGCTACGAAG GCCACACGGA AAAAATTTAC CAGAATAAGG TGAAGATGTT CAATGCGGGC
GGAGAAGTTC CGTTGTTCAA GCGCCTGGGT TTCAATGCGG TGTTTTACGG AGAGGTGATC
GCCGGCAGCC ACATGCCCAA CCTGATGTAC ATGACTACTT TCGACAACAA GGCTTCGCGT
GACGCGCACT GGAAATCTTT CAGCGAGGAT GCGGAATGGA ACAAGCTGAA AGTAAATCCG
GAGTATCAGA ACAACGTTTC AAAAAACACG AGCTTCTATT TGTATCCCAC CGAATATTCG
GATATATAG
 
Protein sequence
MSNYRNLNLL FTFLLLMVAL STVAAPPKRE FYEIKIYHLK NADQEARVEA FLKDAYVPAA 
HRAGIKNVGV FKPVKTDTMA GKLIYVLTPL KSLDQLLTLP KTLDKDAAYT SAGKDYIDAN
YKNAPYARFE SIILQAFTDA PVLTKPALTG PKSERVYELR SYEGHTEKIY QNKVKMFNAG
GEVPLFKRLG FNAVFYGEVI AGSHMPNLMY MTTFDNKASR DAHWKSFSED AEWNKLKVNP
EYQNNVSKNT SFYLYPTEYS DI