10 homologs were found in PanDaTox collection
for query gene Msil_0089 on replicon NC_011666
Organism: Methylocella silvestris BL2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011666  Msil_0089    100 
 
 		 273 bp  541  9.999999999999999e-153  Methylocella silvestris BL2  Bacteria  n/a    normal  0.624512 
 
 
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NC_011666  Msil_0090  pseudouridine synthase, RluA family  94.23 
 
 		 1050 bp  389  1e-106  Methylocella silvestris BL2  Bacteria  n/a    normal  0.768556 
 
 
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NC_007958  RPD_3129  pseudouridine synthase RluD  88.89 
 
 		 1335 bp  60  0.0000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.411663  normal  0.42057 
 
 
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NC_007964  Nham_1575  pseudouridine synthase, RluD  88 
 
 		 1236 bp  52  0.00008  Nitrobacter hamburgensis X14  Bacteria  normal  0.286446  n/a   
 
 
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NC_011004  Rpal_3624  pseudouridine synthase, RluA family  88 
 
 		 1368 bp  52  0.00008  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
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NC_010581  Bind_1312  RluA family pseudouridine synthase  87.5 
 
 		 1053 bp  48.1  0.001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
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NC_004310  BR1000  ribosomal large subunit pseudouridine synthase C  96.3 
 
 		 981 bp  46.1  0.005  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
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NC_009505  BOV_0966  ribosomal large subunit pseudouridine synthase C  96.3 
 
 		 957 bp  46.1  0.005  Brucella ovis ATCC 25840  Bacteria  normal  0.948591  n/a   
 
 
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NC_011369  Rleg2_1884  pseudouridine synthase, RluA family  96.3 
 
 		 990 bp  46.1  0.005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0958449  normal  0.0260992 
 
 
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NC_012850  Rleg_2086  pseudouridine synthase, RluA family  96.3 
 
 		 993 bp  46.1  0.005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.140778  normal  0.342789 
 
 
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