| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1884 |
|---|
| Symbol | |
|---|
| ID | 6980623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 1928953 |
|---|
| End bp | 1929942 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643396607 |
|---|
| Product | pseudouridine synthase, RluA family |
|---|
| Protein accession | YP_002281395 |
|---|
| Protein GI | 209549478 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0958449 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0260992 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGCA TAGAACATAT CAAGGTTGAA GCCGACGAAG CGGGCATGCG GCTCGATCGC
TGGTTCAAGG TACATTTTCC CGGGCTCGGC TTCGGGCCGC TGCAGAAGCT TTTGCGCTCC
GGCCAGGTGC GCGTCGACGG CGGCCGTGTC AAATCGGATG CGCGCGTGCA GCCCGGCCAG
ACGGTGCGGG TGCCGCCGCT CGATGTCGAT GCGAAGAAGT CCGGGCCGAT CGCCGGCAAG
GATCTCAAGC ATTCGTCCGA TTTCGAACTG CTGTCGCGCA TGGTGCTGCA TGAGGACGAT
AAGGTGATCG TGCTCAACAA ACCACCCGGC ATTGCCGTGC AGGGCGGCTC CGGCGTGGCC
CGCCATATCG ACCAGATGCT CGAAGCCTGG ACCAGCCCGA AGGGCGAAAA GCCTAGGCTC
GTTCACCGCC TCGACCGCGA TACGTCAGGT GTTCTCGTGA TCGCCCGCAC CCGGGGCGCC
GCACAGAAGC TGACCGCCGC TTTCCGCGAG CGCGACACCA AGAAGACTTA TTGGGCGCTG
GTCAAGGGCG TGCCGCGCAA GCACGAGGAC AAGATCTCGA CCTGGCTCGT CAAGGAACCG
ACAGCCGATG GCGACCGCAT GCGCATCGCC AAACACGGCG AGGACGGCGC CGATCATGCG
ATTTCCTTCT ACCGCGTCAT CGAAACGGCC GCCCAAAACC TCGCTTGGCT GGAAATGGAA
CCTTATACCG GCCGTACCCA CCAGCTGCGC GTCCATGCCC TGCATATCGG CCATCCGATC
ATCGGCGATC CGAAATATTT CGACGACGAT CCGAACTGGG ATTTTCCGGG CGGCGTCCAG
AAGAAGCTGC ATCTGCACGC GCGCCATATC GACATCCCGC ACCCATCCGG CGGCCGCCTG
CGCGTCAGCG CACCGCTGCC ACCGCATATG GTGCAGACCT GGAACCTTCT CGGTCTCGAC
CTTGCCGGCG CCGAAAGGGA CAGCGAATGA
|
|---|
| Protein sequence | MAGIEHIKVE ADEAGMRLDR WFKVHFPGLG FGPLQKLLRS GQVRVDGGRV KSDARVQPGQ
TVRVPPLDVD AKKSGPIAGK DLKHSSDFEL LSRMVLHEDD KVIVLNKPPG IAVQGGSGVA
RHIDQMLEAW TSPKGEKPRL VHRLDRDTSG VLVIARTRGA AQKLTAAFRE RDTKKTYWAL
VKGVPRKHED KISTWLVKEP TADGDRMRIA KHGEDGADHA ISFYRVIETA AQNLAWLEME
PYTGRTHQLR VHALHIGHPI IGDPKYFDDD PNWDFPGGVQ KKLHLHARHI DIPHPSGGRL
RVSAPLPPHM VQTWNLLGLD LAGAERDSE
|
|---|
| |