Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_0090 |
Symbol | |
ID | 7090405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 81682 |
End bp | 82731 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643463422 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_002360434 |
Protein GI | 217976287 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.768556 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGTCC AGACATATGA AGTCGCCGAA GATGAGGATG GGCTGCGCCT CGACCGCTGG TTCAAGCGCC GCATTCCCGC GCTGTCGCTC TCGCATCTAA ACAAGATCGT CCGCACGGGA CAGGTGCGCG TCGACGGCGC GCGCGTGAAA ACTGCGACGC GGCTGGCGCA GGGCCAGAAC GTCAGGGTGC CGCCGCTCAA CCTCGAAGCC GCGCCGGAAG CCCCAGTGTT CAGGATTTCC GAAGAAGATC AGCGCGATCT GCGCCAGATG ATCCTGTTCG AGGACAAGGA TCTCATGGTC CTCAACAAGC CCTATGGCCT CGCCGTGCAG GGCGGCTCCG GCATGCGCCG CCACATCGAC GGCATGCTCG CCTCCCTGCC CAACGAGCGC GGCGACCGGC CGGTTCTGGT GCATCGGCTC GATCGCGACA CCTCCGGCGT GCTGCTGATC GCCAAGACGC GCAAAATGGC CGCCGACCTT GGCGAAATTT TCCGCTCGCG GCAGGCGCAG AAAATCTATT GGGCTCTGGT CGAGGGCGTG CCGAAACCGG CGCAGGGCAA AATCTCGCTT TTTCTCGCCA AGGGCGAGGG CATGGATGCG CGAGGGCCGC GGCGCAGCGA CGAAGAGCGC GCTTCCATGG AAAAGATGCG CGTCGCCAAA CATGGCGATG AGGACGCGCA GCATTCGGTG ACCTATTACG CCACCGTCGA TACTTTTTCG CCTCGCGCCG CCTGGCTGTC GATGAAGCCG ATCACCGGCC GGACGCATCA GCTGCGCGCC CATGCCGAGG CGATCGGCCA TCCGATCATC GGCGATCCCA AATATGGGCT GCGGCCCAAA ACCGATCCAC GCCGGAACGA TCCGCTGCGC GCCATTCCCG AGACCATCGA GCGCAAGCTG CATCTGCTGG CGCGCCGCCT GGTGCTGCCG CATCCGCGCG GCGGCGTTTT GGACGTCACC GCGCCGCTGC CGCCGCATAT GGCGAATTCC TTCGAGACGT TCGGCTTCGA CGTCAAGCAG TACGACCCGA TCGAGGGCGC GCCGGAATAG
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Protein sequence | MSVQTYEVAE DEDGLRLDRW FKRRIPALSL SHLNKIVRTG QVRVDGARVK TATRLAQGQN VRVPPLNLEA APEAPVFRIS EEDQRDLRQM ILFEDKDLMV LNKPYGLAVQ GGSGMRRHID GMLASLPNER GDRPVLVHRL DRDTSGVLLI AKTRKMAADL GEIFRSRQAQ KIYWALVEGV PKPAQGKISL FLAKGEGMDA RGPRRSDEER ASMEKMRVAK HGDEDAQHSV TYYATVDTFS PRAAWLSMKP ITGRTHQLRA HAEAIGHPII GDPKYGLRPK TDPRRNDPLR AIPETIERKL HLLARRLVLP HPRGGVLDVT APLPPHMANS FETFGFDVKQ YDPIEGAPE
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