20 homologs were found in PanDaTox collection
for query gene Gbem_3199 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002939  GSU3259  cytochrome c family protein  71.01 
 
 		 507 aa  789    Geobacter sulfurreducens PCA  Bacteria  unclonable  0.00302296  n/a   
 
 
-
 
NC_007517  Gmet_3174  cytochrome c family protein  71.68 
 
 		 504 aa  796    Geobacter metallireducens GS-15  Bacteria  unclonable  0.000000000000139741  normal  0.372287 
 
 
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NC_012918  GM21_1063  hypothetical protein  95.66 
 
 		 507 aa  1022    Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.27837e-22 
 
 
-
 
NC_011146  Gbem_3199  hypothetical protein  100 
 
 		 507 aa  1058    Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00139796  n/a   
 
 
-
 
NC_009483  Gura_0861  hypothetical protein  77.51 
 
 		 507 aa  839    Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.0000162424  n/a   
 
 
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NC_008009  Acid345_2712  cytochrome c family protein  47.76 
 
 		 501 aa  506  9.999999999999999e-143  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.627653  normal  1 
 
 
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NC_011891  A2cp1_2287  cytochrome c family protein  41.01 
 
 		 468 aa  342  9e-93  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_2199  cytochrome c family protein  41.18 
 
 		 468 aa  338  1.9999999999999998e-91  Anaeromyxobacter sp. K  Bacteria  normal  0.0994812  n/a   
 
 
-
 
NC_010571  Oter_2584  cytochrome c family protein  37.55 
 
 		 496 aa  336  5.999999999999999e-91  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_0452  cytochrome c family protein  37.06 
 
 		 478 aa  327  4.0000000000000003e-88  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.395423  normal  0.353435 
 
 
-
 
NC_007760  Adeh_1659  cytochrome c family protein  40.79 
 
 		 468 aa  320  3e-86  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.228643  n/a   
 
 
-
 
NC_008607  Ppro_3707  cytochrome c nitrite reductase, small subunit NrfH, putative  34.09 
 
 		 152 aa  52  0.00002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.741906  n/a   
 
 
-
 
NC_009483  Gura_0664  hypothetical protein  35.23 
 
 		 154 aa  52  0.00003  Geobacter uraniireducens Rf4  Bacteria  normal  0.0192323  n/a   
 
 
-
 
NC_002939  GSU3155  cytochrome c nitrite reductase, small subunit NrfH, putative  34.44 
 
 		 134 aa  47.8  0.0005  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_013162  Coch_1100  cytochrome c nitrate reductase, small subunit  29.63 
 
 		 205 aa  46.6  0.001  Capnocytophaga ochracea DSM 7271  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_4235  cytochrome c nitrate reductase, small subunit  26.32 
 
 		 161 aa  45.4  0.002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_2399  cytochrome c nitrite reductase, small subunit NrfH, putative  32.95 
 
 		 153 aa  45.1  0.003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.524559  normal  1 
 
 
-
 
NC_013512  Sdel_0706  cytochrome c nitrate reductase, small subunit  27.27 
 
 		 177 aa  45.4  0.003  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.000199981  n/a   
 
 
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NC_010814  Glov_1043  cytochrome c nitrate reductase, small subunit  32.58 
 
 		 161 aa  44.7  0.004  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00711927  n/a   
 
 
-
 
NC_011769  DvMF_2386  cytochrome c nitrite reductase small subunit  30.91 
 
 		 158 aa  44.7  0.004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
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