| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1043 |
|---|
| Symbol | |
|---|
| ID | 6368839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 1084322 |
|---|
| End bp | 1084807 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642676438 |
|---|
| Product | cytochrome c nitrate reductase, small subunit |
|---|
| Protein accession | YP_001951286 |
|---|
| Protein GI | 189424109 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
|---|
| TIGRFAM ID | [TIGR03153] cytochrome c nitrate reductase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00711927 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGA ATCTGAGCTA CACACAGAAA CAGGCGCTGC TGATTGCAGT AGTCTGTTGT
GCGCTGTTGG GGCTGTATCT GACACTGGGG CCGCCGCATC TGCTGGCCAA GTCTGAATCA
CCGGATTTCT GTGCGAGCTG CCATGTCATG GAAGCACAGC ACACCGCCTT CATGCATGCC
GGTGCCCATC GCCGCTTCAA ATGTGTCGAC TGCCATCTGC CCAACGACAA CCTGGCCAGC
CACTACATCT GGAAATCCAT AGACGGTATG AAGGACGTAT TGTTCTTCTA CTCCGGCAAG
GTCCCGGAGA AGATCACGCT GTCTGAACAT GGTGCCAAGG TGGTCAAGGC CAACTGCATC
AGATGCCACG AAACGCTGGT ATCGCAGATG GATACGTCAC GCAACTGCTG GAGCTGCCAC
CGCCGGGTAA CCCATACCGG TACCGGTGCA CTGCAAACCA ACCCGTTACT ACAAACAAAC
CCCTGA
|
|---|
| Protein sequence | MLKNLSYTQK QALLIAVVCC ALLGLYLTLG PPHLLAKSES PDFCASCHVM EAQHTAFMHA
GAHRRFKCVD CHLPNDNLAS HYIWKSIDGM KDVLFFYSGK VPEKITLSEH GAKVVKANCI
RCHETLVSQM DTSRNCWSCH RRVTHTGTGA LQTNPLLQTN P
|
|---|
| |