20 homologs were found in PanDaTox collection
for query gene Cpha266_0428 on replicon NC_008639
Organism: Chlorobium phaeobacteroides DSM 266



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008639  Cpha266_0428  hydroxyneurosporene synthase  100 
 
 
376 aa  781  Chlorobium phaeobacteroides DSM 266  Bacteria  decreased coverage  0.000692548  n/a   
 
 
-
 
NC_010803  Clim_0360  hydroxyneurosporene synthase  64.36 
 
 
376 aa  519  1e-146  Chlorobium limicola DSM 245  Bacteria  normal  0.0314991  n/a   
 
 
-
 
NC_011060  Ppha_0465  hydroxyneurosporene synthase  62.47 
 
 
376 aa  495  1e-139  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_1720  hydroxyneurosporene synthase CrtC  58.95 
 
 
380 aa  482  1e-135  Chlorobium luteolum DSM 273  Bacteria  hitchhiker  0.000497436  normal  0.211478 
 
 
-
 
NC_011059  Paes_1781  hydroxyneurosporene synthase  53.72 
 
 
376 aa  455  1e-127  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.0186399 
 
 
-
 
NC_010831  Cphamn1_1988  hydroxyneurosporene synthase  52.39 
 
 
376 aa  430  1e-119  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.0180674  normal  0.149508 
 
 
-
 
NC_007514  Cag_0393  hydroxyneurosporene synthase CrtC  50.68 
 
 
373 aa  393  1e-108  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.119475  n/a   
 
 
-
 
NC_009485  BBta_6442  hydroxyneurosporene synthase  21.57 
 
 
404 aa  66.2  9e-10  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1288  hydroxyneurosporene synthase  24.07 
 
 
319 aa  57.8  3e-07  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.368952  normal 
 
 
-
 
NC_013517  Sterm_1357  hypothetical protein  20.82 
 
 
351 aa  57  5e-07  Sebaldella termitidis ATCC 33386  Bacteria  decreased coverage  2.87593e-07  n/a   
 
 
-
 
NC_007958  RPD_3761  hydroxyneurosporene synthase  23.74 
 
 
317 aa  55.5  1e-06  Rhodopseudomonas palustris BisB5  Bacteria  normal  hitchhiker  0.00499393 
 
 
-
 
NC_007778  RPB_4006  hydroxyneurosporene synthase  22.4 
 
 
317 aa  54.3  3e-06  Rhodopseudomonas palustris HaA2  Bacteria  normal  hitchhiker  0.00208481 
 
 
-
 
NC_010511  M446_3692  hydroxyneurosporene synthase  25.32 
 
 
297 aa  54.3  4e-06  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00263828 
 
 
-
 
NC_010172  Mext_2725  hydroxyneurosporene synthase  21.83 
 
 
300 aa  50.8  4e-05  Methylobacterium extorquens PA1  Bacteria  normal  0.50552  normal 
 
 
-
 
NC_011757  Mchl_2952  hydroxyneurosporene synthase  21.53 
 
 
299 aa  50.1  7e-05  Methylobacterium chloromethanicum CM4  Bacteria  normal  hitchhiker  0.00707187 
 
 
-
 
NC_011004  Rpal_1705  hydroxyneurosporene synthase  26.47 
 
 
317 aa  47.8  0.0003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_25950  Protein of unknown function (DUF2006)  25.23 
 
 
507 aa  47.4  0.0004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.311446 
 
 
-
 
NC_011666  Msil_2047  hydroxyneurosporene synthase  23.1 
 
 
283 aa  45.8  0.001  Methylocella silvestris BL2  Bacteria  n/a    normal  0.329916 
 
 
-
 
NC_007643  Rru_A2985  hydroxyneurosporene synthase  25.48 
 
 
253 aa  45.8  0.001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.813569  n/a   
 
 
-
 
NC_008789  Hhal_1615  hydroxyneurosporene synthase  22.96 
 
 
275 aa  44.3  0.003  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
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