24 homologs were found in PanDaTox collection
for query gene Rpal_1705 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_1705  hydroxyneurosporene synthase  100 
 
 
317 aa  644    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3761  hydroxyneurosporene synthase  79.81 
 
 
317 aa  534  1e-151  Rhodopseudomonas palustris BisB5  Bacteria  normal  hitchhiker  0.00499393 
 
 
-
 
NC_007778  RPB_4006  hydroxyneurosporene synthase  79.81 
 
 
317 aa  520  1e-146  Rhodopseudomonas palustris HaA2  Bacteria  normal  hitchhiker  0.00208481 
 
 
-
 
NC_007925  RPC_1288  hydroxyneurosporene synthase  66.98 
 
 
319 aa  450  1e-125  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.368952  normal 
 
 
-
 
NC_009485  BBta_6442  hydroxyneurosporene synthase  55.1 
 
 
404 aa  345  4e-94  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3692  hydroxyneurosporene synthase  53.69 
 
 
297 aa  327  2.0000000000000001e-88  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00263828 
 
 
-
 
NC_010172  Mext_2725  hydroxyneurosporene synthase  53 
 
 
300 aa  319  5e-86  Methylobacterium extorquens PA1  Bacteria  normal  0.50552  normal 
 
 
-
 
NC_011757  Mchl_2952  hydroxyneurosporene synthase  52.33 
 
 
299 aa  317  2e-85  Methylobacterium chloromethanicum CM4  Bacteria  normal  hitchhiker  0.00707187 
 
 
-
 
NC_010725  Mpop_2847  hydroxyneurosporene synthase  52.96 
 
 
286 aa  295  5e-79  Methylobacterium populi BJ001  Bacteria  normal  normal  0.724787 
 
 
-
 
NC_010505  Mrad2831_2823  hydroxyneurosporene synthase  51.05 
 
 
286 aa  287  2e-76  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.467897  normal  0.293634 
 
 
-
 
NC_011666  Msil_2047  hydroxyneurosporene synthase  49.82 
 
 
283 aa  268  8e-71  Methylocella silvestris BL2  Bacteria  n/a    normal  0.329916 
 
 
-
 
NC_008789  Hhal_1615  hydroxyneurosporene synthase  46.13 
 
 
275 aa  249  5e-65  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2985  hydroxyneurosporene synthase  46 
 
 
253 aa  218  7.999999999999999e-56  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.813569  n/a   
 
 
-
 
NC_009049  Rsph17029_1911  hydroxyneurosporene synthase  40.65 
 
 
279 aa  211  1e-53  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.581622 
 
 
-
 
NC_009428  Rsph17025_2041  hydroxyneurosporene synthase  40.65 
 
 
281 aa  211  1e-53  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.42927 
 
 
-
 
NC_007493  RSP_0267  hydroxyneurosporene synthase  40.65 
 
 
279 aa  211  1e-53  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_3512  hydroxyneurosporene dehydrogenase  42.26 
 
 
252 aa  185  1.0000000000000001e-45  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.411163  normal  0.914235 
 
 
-
 
NC_007802  Jann_0184  hydroxyneurosporene synthase  39.57 
 
 
240 aa  180  2.9999999999999997e-44  Jannaschia sp. CCS1  Bacteria  normal  0.7318  normal 
 
 
-
 
NC_010831  Cphamn1_1988  hydroxyneurosporene synthase  23.55 
 
 
376 aa  55.1  0.000002  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.0180674  normal  0.149508 
 
 
-
 
NC_007514  Cag_0393  hydroxyneurosporene synthase CrtC  23.98 
 
 
373 aa  54.7  0.000002  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.119475  n/a   
 
 
-
 
NC_011059  Paes_1781  hydroxyneurosporene synthase  22.3 
 
 
376 aa  52.8  0.000008  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.0186399 
 
 
-
 
NC_008639  Cpha266_0428  hydroxyneurosporene synthase  26.47 
 
 
376 aa  47.8  0.0003  Chlorobium phaeobacteroides DSM 266  Bacteria  decreased coverage  0.000692548  n/a   
 
 
-
 
NC_010803  Clim_0360  hydroxyneurosporene synthase  20.98 
 
 
376 aa  47  0.0004  Chlorobium limicola DSM 245  Bacteria  normal  0.0314991  n/a   
 
 
-
 
NC_011060  Ppha_0465  hydroxyneurosporene synthase  20.77 
 
 
376 aa  44.7  0.002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
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