Gene BBta_6442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6442 
SymbolcrtC 
ID5154641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6711249 
End bp6712463 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content68% 
IMG OID640561142 
Producthydroxyneurosporene synthase 
Protein accessionYP_001242258 
Protein GI148257673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCCGC CAGACCTTCG ACCTGTTGCA GCGCTGCGGC CTCAGCGTCG CGACGACACC 
GGAACTGACC CGCGTGACGA CGCCGGTGGA TTTCAACCGG ATGTTTCCGG GCACGGGGGG
CGCGCTGTAC GGCCGCAGCT CGCATGGCTG GATGGCGTCG TTCCAGCGCC CGGGGGCGCA
GACGAAACTG CCGGGACTCT ACATAGCCGG GGGCAGCGCG CATCCGGGGC CGGGCGTGCC
GATGGCGGCG CTGTCGGGCC GGATGGTAGC CGCGCGGGCG ATTCTGGACC TCGCTTCGAC
CGCGCCATCC CGAAGGACGG CTATGCATGG TGGTATGTCG ACGCGCTGAG CGACGACGGC
CGCTTCGGCA TCACTCTGAT CGCCTTCATC GGCAGCGTGT TCTCGCCATA TTATGCGTGG
GCTCGGCGGC GCGGCCCGGC TGATCCGGAA GATCATTGCG CGCTCAATGT CGCGCTGTAT
GGCGCGCGCG CGCGGCGCTG GTCAATGACC GAGCGCGGCC GCGGCGCGAT CGTGCGCGAT
GCCGAGAGCT TCAAGATCGG CCCGAGCCGC CTCGCCTGGA CCGGCCGCGA GCTGACGATC
GAGATCAACG AGGTCACGGT GCCCTGGCCA CTGCCACTGC GTGGCAAGGT GCGCGTGGTG
CCGACAGCGC TGAATGAGAT CGCGTTCACG CTCGATGCGG CCGGACGTCA CCGCTGGCAG
CCGATCGCGC CGTGCTGCCG CGTCTCGGTT GATTTCGATC ATCCCGACCT GCACTGGCGC
GGCGACGGCT ATTTCGACAT CAACCATGGC GATGCGCCGC TGGAGCGCGA TTTCAAGAGC
TGGCAATGGT CGCGCGCCGC GACGCGCACC GGCACCGTAA TCTCCTACGA CACGACAGCG
CGGACCGGCG CCGGCAAGTC GATCGCGCTG CACATCGATC CCGACGCCAG GCTGGACCGG
CTCGCGCCGC TCGCTGACGC ACCCTTGCGC AGAACGCTGT GGCGCATCGA CCGCAGCGCC
CGCGCAGACT CCGAGACACC GGTCCGCGTC GTCAGCACAC TGGAAGACGC ACCGTTCTAC
GCCCGCTCCC ACCTCGCTGC CCGCATCGGC GGCGAAGACG TCGCCGTCAT GCATGAAAGC
CTGTCACTCG ACAGGTTCAA GCAGCCAATC GTGCAAGCGA TGCTGCCGTT CCGCATGCCG
CGGTGGAGCG GATGA
 
Protein sequence
MCPPDLRPVA ALRPQRRDDT GTDPRDDAGG FQPDVSGHGG RAVRPQLAWL DGVVPAPGGA 
DETAGTLHSR GQRASGAGRA DGGAVGPDGS RAGDSGPRFD RAIPKDGYAW WYVDALSDDG
RFGITLIAFI GSVFSPYYAW ARRRGPADPE DHCALNVALY GARARRWSMT ERGRGAIVRD
AESFKIGPSR LAWTGRELTI EINEVTVPWP LPLRGKVRVV PTALNEIAFT LDAAGRHRWQ
PIAPCCRVSV DFDHPDLHWR GDGYFDINHG DAPLERDFKS WQWSRAATRT GTVISYDTTA
RTGAGKSIAL HIDPDARLDR LAPLADAPLR RTLWRIDRSA RADSETPVRV VSTLEDAPFY
ARSHLAARIG GEDVAVMHES LSLDRFKQPI VQAMLPFRMP RWSG