57 homologs were found in PanDaTox collection
for query gene Cag_0611 on replicon NC_007514
Organism: Chlorobium chlorochromatii CaD3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007514  Cag_0611  putative anti-sigma regulatory factor (serine/threonine protein kinase)  100 
 
 
136 aa  279  1e-74  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  2.21562e-08  n/a   
 
 
-
 
NC_011060  Ppha_1516  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.22 
 
 
131 aa  82  2e-15  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.124385  n/a   
 
 
-
 
NC_008639  Cpha266_1094  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.78 
 
 
146 aa  75.9  2e-13  Chlorobium phaeobacteroides DSM 266  Bacteria  unclonable  6.60088e-09  n/a   
 
 
-
 
NC_010803  Clim_0974  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.33 
 
 
137 aa  70.9  5e-12  Chlorobium limicola DSM 245  Bacteria  normal  0.0103078  n/a   
 
 
-
 
NC_011059  Paes_1340  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.62 
 
 
139 aa  69.7  1e-11  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.00268511  unclonable  1.09238e-06 
 
 
-
 
NC_007512  Plut_1162  putative anti-sigma regulatory factor (serine/threonine protein kinase)  33.59 
 
 
135 aa  69.3  2e-11  Chlorobium luteolum DSM 273  Bacteria  hitchhiker  6.40606e-06  normal  0.134591 
 
 
-
 
NC_010831  Cphamn1_1139  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.61 
 
 
147 aa  67  9e-11  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.212464 
 
 
-
 
NC_008255  CHU_3500  anti-sigma regulatory factor  28.7 
 
 
133 aa  65.1  3e-10  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.314034  normal 
 
 
-
 
NC_013501  Rmar_1323  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
134 aa  63.2  1e-09  Rhodothermus marinus DSM 4252  Bacteria  normal  0.105677  n/a   
 
 
-
 
NC_008009  Acid345_2515  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.61 
 
 
148 aa  57.8  5e-08  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.538602  normal  0.204677 
 
 
-
 
NC_014148  Plim_2056  anti-sigma regulatory factor  26.19 
 
 
143 aa  54.7  4e-07  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.773482  n/a   
 
 
-
 
NC_008609  Ppro_2661  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.89 
 
 
151 aa  52.8  2e-06  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0789133  n/a   
 
 
-
 
NC_009767  Rcas_4212  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.79 
 
 
144 aa  52  3e-06  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.797188  normal  0.229717 
 
 
-
 
NC_002977  MCA1685  anti-sigma B factor  29.79 
 
 
142 aa  50.8  5e-06  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1584  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
141 aa  51.2  5e-06  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2650  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
141 aa  51.2  5e-06  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0030  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.97 
 
 
144 aa  50.8  6e-06  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.786698 
 
 
-
 
NC_010814  Glov_2102  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.16 
 
 
143 aa  49.7  1e-05  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2317  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.57 
 
 
155 aa  48.9  2e-05  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.128595  normal  0.13523 
 
 
-
 
NC_009483  Gura_2043  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.77 
 
 
141 aa  48.5  3e-05  Geobacter uraniireducens Rf4  Bacteria  unclonable  3.88253e-11  n/a   
 
 
-
 
NC_007484  Noc_2977  anti-sigma regulatory factor (Ser/Thr protein kinase  29.25 
 
 
141 aa  48.1  4e-05  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2399  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.51 
 
 
142 aa  47.8  5e-05  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.477606 
 
 
-
 
NC_009972  Haur_1624  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.91 
 
 
154 aa  47  9e-05  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0401  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.29 
 
 
144 aa  47  9e-05  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00256167  n/a   
 
 
-
 
NC_009012  Cthe_0119  anti-sigma F factor  31.63 
 
 
149 aa  47  9e-05  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1228  putative anti-sigma regulatory factor (serine/threonine protein kinase)  28.24 
 
 
144 aa  47  9e-05  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.011235 
 
 
-
 
NC_002939  GSU1426  rsbW protein, putative  29.76 
 
 
149 aa  47  0.0001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2999  putative anti-sigma regulatory factor, serine/threonine protein kinase  30 
 
 
136 aa  46.2  0.0001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_3724  ATPase domain-containing protein  31.91 
 
 
163 aa  46.6  0.0001  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3337  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.33 
 
 
158 aa  45.8  0.0002  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_2838  putative anti-sigma regulatory factor serine/threonine protein kinase  31.71 
 
 
147 aa  45.4  0.0003  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1749  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.03 
 
 
147 aa  45.1  0.0003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2468  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.03 
 
 
147 aa  45.4  0.0003  Geobacter bemidjiensis Bem  Bacteria  normal  0.0214018  n/a   
 
 
-
 
NC_008009  Acid345_2985  putative anti-sigma regulatory factor, serine/threonine protein kinase  22.48 
 
 
321 aa  44.3  0.0005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.369432  normal 
 
 
-
 
NC_011831  Cagg_3034  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.66 
 
 
155 aa  44.7  0.0005  Chloroflexus aggregans DSM 9485  Bacteria  normal  decreased coverage  2.75353e-06 
 
 
-
 
NC_008312  Tery_4818  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.81 
 
 
140 aa  44.7  0.0005  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8976  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.93 
 
 
146 aa  44.3  0.0006  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_2761  response regulator receiver  34.67 
 
 
300 aa  43.9  0.0007  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.428071  n/a   
 
 
-
 
NC_007333  Tfu_1352  hypothetical protein  31.96 
 
 
145 aa  43.9  0.0008  Thermobifida fusca YX  Bacteria  normal  0.935548  n/a   
 
 
-
 
NC_012034  Athe_2394  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.41 
 
 
150 aa  43.9  0.0008  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0350  PAS/PAC sensor hybrid histidine kinase  29.03 
 
 
1390 aa  43.5  0.001  Mycobacterium sp. MCS  Bacteria  normal  0.0937102  n/a   
 
 
-
 
NC_009012  Cthe_2901  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.09 
 
 
144 aa  43.1  0.001  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00340315  n/a   
 
 
-
 
NC_014148  Plim_2329  response regulator receiver  39.22 
 
 
301 aa  43.5  0.001  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.25746  n/a   
 
 
-
 
NC_008705  Mkms_0360  PAS/PAC sensor hybrid histidine kinase  29.03 
 
 
1390 aa  43.5  0.001  Mycobacterium sp. KMS  Bacteria  normal  normal  0.592677 
 
 
-
 
NC_013595  Sros_3929  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.04 
 
 
176 aa  42.7  0.002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0862817  hitchhiker  0.00846982 
 
 
-
 
NC_009077  Mjls_0339  PAS/PAC sensor hybrid histidine kinase  29.03 
 
 
1390 aa  42.7  0.002  Mycobacterium sp. JLS  Bacteria  normal  0.726297  normal  0.77171 
 
 
-
 
NC_009943  Dole_0141  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.67 
 
 
160 aa  42.7  0.002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3487  serine-protein kinase RsbW  32.38 
 
 
162 aa  42.4  0.002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013216  Dtox_2065  anti-sigma regulatory factor, serine/threonine protein kinase  27.43 
 
 
146 aa  42  0.003  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000202652  normal 
 
 
-
 
NC_013171  Apre_1471  putative signal transduction histidine kinase  29.36 
 
 
127 aa  42  0.003  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3954  multi-sensor signal transduction histidine kinase  28.1 
 
 
1370 aa  41.2  0.005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.364846  n/a   
 
 
-
 
NC_008817  P9515_10061  anti-sigma regulatory factor (Ser/Thr protein kinase)  29.52 
 
 
147 aa  40.8  0.007  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.292837  n/a   
 
 
-
 
NC_008009  Acid345_4066  response regulator receiver protein  26.19 
 
 
292 aa  40.4  0.008  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.738646  normal  0.146742 
 
 
-
 
NC_009012  Cthe_3187  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.78 
 
 
140 aa  40.4  0.008  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00310168  n/a   
 
 
-
 
NC_009767  Rcas_4100  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.41 
 
 
154 aa  40.4  0.008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.39959  normal  0.110814 
 
 
-
 
NC_014148  Plim_3703  response regulator receiver  31.58 
 
 
303 aa  40.4  0.009  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.301456  n/a   
 
 
-
 
NC_010816  BLD_1770  putative stress-responsive transcriptional regulator  36.99 
 
 
427 aa  40.4  0.009  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
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