67 homologs were found in PanDaTox collection
for query gene Ccel_0401 on replicon NC_011898
Organism: Clostridium cellulolyticum H10



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011898  Ccel_0401  putative anti-sigma regulatory factor, serine/threonine protein kinase  100 
 
 
144 aa  289  7e-78  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00256167  n/a   
 
 
-
 
NC_009012  Cthe_2901  putative anti-sigma regulatory factor, serine/threonine protein kinase  40.94 
 
 
144 aa  96.7  9e-20  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00340315  n/a   
 
 
-
 
NC_012034  Athe_2394  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.1 
 
 
150 aa  88.6  2e-17  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1471  putative signal transduction histidine kinase  39.33 
 
 
127 aa  63.5  0.0000000009  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0141  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.56 
 
 
160 aa  62.8  0.000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_3653  putative anti-sigma regulatory factor serine/threonine protein kinase  30.56 
 
 
149 aa  63.2  0.000000001  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3633  putative anti-sigma regulatory factor (Ser/Thr protein kinase)  30 
 
 
149 aa  61.6  0.000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.327688 
 
 
-
 
NC_010814  Glov_2102  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
143 aa  60.5  0.000000008  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2056  anti-sigma regulatory factor  30.1 
 
 
143 aa  59.3  0.00000002  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.773482  n/a   
 
 
-
 
NC_007513  Syncc9902_1270  putative anti-sigma regulatory factor (serine/threonine protein kinase)  29 
 
 
133 aa  57.4  0.00000006  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1228  putative anti-sigma regulatory factor (serine/threonine protein kinase)  33.98 
 
 
144 aa  57.4  0.00000007  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.011235 
 
 
-
 
NC_011729  PCC7424_3304  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.08 
 
 
153 aa  56.6  0.0000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008009  Acid345_2317  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.62 
 
 
155 aa  55.8  0.0000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.128595  normal  0.13523 
 
 
-
 
NC_008009  Acid345_2515  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.97 
 
 
148 aa  55.5  0.0000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.538602  normal  0.204677 
 
 
-
 
NC_009012  Cthe_3187  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.44 
 
 
140 aa  56.2  0.0000002  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00310168  n/a   
 
 
-
 
NC_007498  Pcar_1875  anti-sigma regulatory factor  29.91 
 
 
139 aa  55.1  0.0000003  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000000201046  n/a   
 
 
-
 
NC_009976  P9211_07231  anti-sigma regulatory factor (Ser/Thr protein kinase)  24.81 
 
 
131 aa  55.1  0.0000003  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal  0.152597 
 
 
-
 
NC_008820  P9303_16351  anti-sigma regulatory factor (Ser/Thr protein kinase)  22.92 
 
 
164 aa  55.1  0.0000003  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.109557 
 
 
-
 
NC_008255  CHU_3500  anti-sigma regulatory factor  29.31 
 
 
133 aa  54.7  0.0000005  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.314034  normal 
 
 
-
 
NC_007604  Synpcc7942_1438  putative anti-sigma regulatory factor  32.11 
 
 
164 aa  54.3  0.0000006  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0533473  normal  0.759887 
 
 
-
 
NC_013161  Cyan8802_4123  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.48 
 
 
146 aa  54.3  0.0000006  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_4084  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.48 
 
 
146 aa  54.3  0.0000006  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_2243  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.78 
 
 
159 aa  53.9  0.0000007  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0809953  normal  0.451472 
 
 
-
 
NC_002939  GSU1426  rsbW protein, putative  29.46 
 
 
149 aa  53.9  0.0000008  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1323  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.03 
 
 
134 aa  53.1  0.000001  Rhodothermus marinus DSM 4252  Bacteria  normal  0.105677  n/a   
 
 
-
 
NC_008609  Ppro_2661  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.71 
 
 
151 aa  52  0.000002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0789133  n/a   
 
 
-
 
NC_002977  MCA1685  anti-sigma B factor  30.19 
 
 
142 aa  52.4  0.000002  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_1200  putative anti-sigma regulatory factor (serine/threonine protein kinase)  27.37 
 
 
145 aa  52.4  0.000002  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_008816  A9601_09371  anti-sigma regulatory factor (Ser/Thr protein kinase)  31.25 
 
 
144 aa  50.4  0.000008  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.596891  n/a   
 
 
-
 
NC_011059  Paes_1340  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.79 
 
 
139 aa  49.7  0.00001  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.00268511  unclonable  0.00000109238 
 
 
-
 
NC_009091  P9301_09361  anti-sigma regulatory factor (Ser/Thr protein kinase)  27.56 
 
 
144 aa  49.7  0.00001  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3034  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.32 
 
 
155 aa  49.3  0.00002  Chloroflexus aggregans DSM 9485  Bacteria  normal  decreased coverage  0.00000275353 
 
 
-
 
NC_013595  Sros_3929  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.2 
 
 
176 aa  48.5  0.00003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0862817  hitchhiker  0.00846982 
 
 
-
 
NC_008817  P9515_10061  anti-sigma regulatory factor (Ser/Thr protein kinase)  24.03 
 
 
147 aa  47.8  0.00005  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.292837  n/a   
 
 
-
 
NC_011884  Cyan7425_3338  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.41 
 
 
138 aa  47.8  0.00005  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_1112  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.16 
 
 
160 aa  47.8  0.00006  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2985  putative anti-sigma regulatory factor, serine/threonine protein kinase  22.48 
 
 
321 aa  47.4  0.00007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.369432  normal 
 
 
-
 
NC_007514  Cag_0611  putative anti-sigma regulatory factor (serine/threonine protein kinase)  32.29 
 
 
136 aa  47  0.00009  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.0000000221562  n/a   
 
 
-
 
NC_013216  Dtox_2065  anti-sigma regulatory factor, serine/threonine protein kinase  33.01 
 
 
146 aa  45.8  0.0002  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000202652  normal 
 
 
-
 
NC_007484  Noc_2977  anti-sigma regulatory factor (Ser/Thr protein kinase  26.47 
 
 
141 aa  45.8  0.0002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007335  PMN2A_0138  anti-sigma regulatory factor (Ser/Thr protein kinase)  29.52 
 
 
130 aa  46.2  0.0002  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2329  response regulator receiver  25 
 
 
301 aa  45.8  0.0002  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.25746  n/a   
 
 
-
 
NC_011060  Ppha_1516  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
131 aa  45.8  0.0002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.124385  n/a   
 
 
-
 
NC_007577  PMT9312_0877  anti-sigma regulatory factor (Ser/Thr protein kinase)  26.77 
 
 
144 aa  45.1  0.0003  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2043  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.44 
 
 
141 aa  45.4  0.0003  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000388253  n/a   
 
 
-
 
NC_002967  TDE0102  cyclic nucleotide-binding protein  23.18 
 
 
430 aa  45.1  0.0004  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4100  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.22 
 
 
154 aa  45.1  0.0004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.39959  normal  0.110814 
 
 
-
 
NC_008819  NATL1_07701  anti-sigma regulatory factor (Ser/Thr protein kinase)  26.47 
 
 
130 aa  44.7  0.0004  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.0584131 
 
 
-
 
NC_007912  Sde_3118  response regulator receiver domain-containing protein  28.08 
 
 
563 aa  44.3  0.0006  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3290  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.43 
 
 
160 aa  44.3  0.0006  Roseiflexus sp. RS-1  Bacteria  normal  0.018648  normal 
 
 
-
 
NC_011830  Dhaf_4432  putative anti-sigma regulatory factor, serine/threonine protein kinase  24.78 
 
 
149 aa  44.3  0.0006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2331  putative anti-sigma regulatory factor, serine/threonine protein kinase  24.32 
 
 
151 aa  43.9  0.0007  Rhodothermus marinus DSM 4252  Bacteria  normal  0.571842  n/a   
 
 
-
 
NC_009654  Mmwyl1_3440  response regulator receiver protein  27.85 
 
 
572 aa  43.5  0.0009  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_0195  response regulator receiver domain-containing protein  29.31 
 
 
300 aa  43.1  0.001  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4212  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.83 
 
 
144 aa  43.1  0.001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.797188  normal  0.229717 
 
 
-
 
NC_013411  GYMC61_2719  integral membrane sensor signal transduction histidine kinase  29.41 
 
 
576 aa  43.1  0.001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008228  Patl_1594  response regulator receiver protein  35.48 
 
 
548 aa  42  0.002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1094  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.18 
 
 
146 aa  42.7  0.002  Chlorobium phaeobacteroides DSM 266  Bacteria  unclonable  0.00000000660088  n/a   
 
 
-
 
NC_013757  Gobs_3675  putative anti-sigma regulatory factor, serine/threonine protein kinase  22.67 
 
 
143 aa  42  0.003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.709341  n/a   
 
 
-
 
NC_013173  Dbac_2999  putative anti-sigma regulatory factor, serine/threonine protein kinase  28 
 
 
136 aa  41.2  0.004  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0030  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.02 
 
 
144 aa  41.6  0.004  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.786698 
 
 
-
 
NC_013411  GYMC61_2468  putative anti-sigma regulatory factor, serine/threonine protein kinase  23.36 
 
 
141 aa  41.2  0.005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008576  Mmc1_0241  response regulator receiver protein  25.2 
 
 
309 aa  41.2  0.005  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1624  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.36 
 
 
154 aa  40.8  0.006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1584  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.47 
 
 
141 aa  40.4  0.007  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2650  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.47 
 
 
141 aa  40.4  0.007  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3337  putative anti-sigma regulatory factor, serine/threonine protein kinase  21.37 
 
 
158 aa  40  0.01  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
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