11 homologs were found in PanDaTox collection
for query gene CHU_2886 on replicon NC_008255
Organism: Cytophaga hutchinsonii ATCC 33406



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008255  CHU_2886  O-antigen ligase-like  100 
 
 
414 aa  829    Cytophaga hutchinsonii ATCC 33406  Bacteria  decreased coverage  0.0000199013  normal  0.062273 
 
 
-
 
NC_009783  VIBHAR_02223  hypothetical protein  27.32 
 
 
461 aa  56.2  0.000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011369  Rleg2_0274  O-antigen polymerase  24 
 
 
444 aa  50.4  0.00005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_5389  O-antigen polymerase (wzy)  24.88 
 
 
405 aa  48.1  0.0003  Bacillus cereus ATCC 10987  Bacteria  normal  0.933006  n/a   
 
 
-
 
NC_013456  VEA_003538  putative membrane protein of ExoQ family involved in exopolysaccharide production  23.83 
 
 
454 aa  47.8  0.0004  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_02935  hypothetical protein  22.55 
 
 
408 aa  45.8  0.001  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1380  O-antigen polymerase  28.81 
 
 
313 aa  44.7  0.003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.563149  normal  0.0271558 
 
 
-
 
NC_003910  CPS_5004  O-antigen polymerase family protein  29.53 
 
 
436 aa  43.5  0.007  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_0024  O-antigen polymerase  26.49 
 
 
456 aa  43.1  0.008  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4579  O-antigen polymerase  27.46 
 
 
448 aa  43.1  0.009  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.17078 
 
 
-
 
NC_009441  Fjoh_2813  O-antigen polymerase  22.65 
 
 
773 aa  42.7  0.01  Flavobacterium johnsoniae UW101  Bacteria  normal  0.192356  n/a   
 
 
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