| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1380 |
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| Symbol | |
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| ID | 3682811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1701588 |
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| End bp | 1702529 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637716718 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_321899 |
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| Protein GI | 75907603 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.563149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0271558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTATT CCATAAGAGA GCAAATGAGG CTCATAGCTT TAGCTCTTGG TGTAGCCACA
TTATTATCTC TGTTTTTCTC TACATTCCTG CCAGATTATA TTCACAAAGC CCCTGAATTA
GCAGGAATGT GGAGTGGAAT TTATGGACAT AAAAATGAGC TAGGATACAT GATGGCGTGG
AGTGCGGGAA TTTTTCTGCA CTTAGCCTTA AGTAATTATC AATATACTTG GTTGATGTGG
ACATTATGTG GTGTGGCTAC ATCCCTAATT ATCCTTTCCC GTTCTACGAC ATCTTTGACA
ATCTTATTAA CAATAATCCT AATTTTGCCT TTTTATAGAT TTTTCAAAAA AACCAATTAT
AAATTACAAG TTATTATGAT TGGTTTAGCT CTAATATTAC TCACACTTTC TACAATATTA
CTGATGACTA ATATTGAAAA TATCGTGGGT ACTTCAGGTA AAGATTTAAC TTTTAACGGG
CGTGCTGATC TCTGGGAACC AATAATTTCC AAAGTTTGGG AAAGACCTTG GTTTGGTTAT
GGATATTACG GGTTTTGGAA TAGTCCTGAA GCAGCTAATG TCAGAGCAAC CTACGAATGG
GCGAGTAATT CCCATAATGG TTTCTTGGAA CTATTGTTAG ACATAGGATT TTTAGGCTTT
TTGGTATTTG CAGCCGGATT TATACGATTT TTTGTCCTGG CATTAGGTCG AATTATTTCA
GTAGCCAAAA AGCCAGAAGA TTATTGGCCG ATGCAAATGT TAATTATCAT TGTTATCGTC
AATTTTTCCG AAGCCAGATT ACTAACTCCG AGTTGGAACT GGTTAATGTA TATCACAACT
TCCTTATCAT TAAGTCTTAG CTATCAGCGA ATACGCATGG GTATCAAAGA AGATTTGAAA
GCAGAATTTA TGTCGTCGAA TCGAATAACT GTAAGGGAGT AA
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| Protein sequence | MRYSIREQMR LIALALGVAT LLSLFFSTFL PDYIHKAPEL AGMWSGIYGH KNELGYMMAW
SAGIFLHLAL SNYQYTWLMW TLCGVATSLI ILSRSTTSLT ILLTIILILP FYRFFKKTNY
KLQVIMIGLA LILLTLSTIL LMTNIENIVG TSGKDLTFNG RADLWEPIIS KVWERPWFGY
GYYGFWNSPE AANVRATYEW ASNSHNGFLE LLLDIGFLGF LVFAAGFIRF FVLALGRIIS
VAKKPEDYWP MQMLIIIVIV NFSEARLLTP SWNWLMYITT SLSLSLSYQR IRMGIKEDLK
AEFMSSNRIT VRE
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