23 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Dtpsy_0168  CDS  NC_011992  189371  189907  537  shikimate kinase  YP_002551653  decreased coverage  0.00656319  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_0382  CDS  NC_011992  394369  395967  1599  FAD dependent oxidoreductase  YP_002551866  decreased coverage  8.68135e-07  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_0383  CDS  NC_011992  396159  396527  369  50S ribosomal protein L14  YP_002551867  decreased coverage  3.37556e-08  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_0651  CDS  NC_011992  676254  676931  678  hypothetical protein  YP_002552131  decreased coverage  0.00814892  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_0657  CDS  NC_011992  679678  680490  813  cobalamin-5-phosphate synthase CobS  YP_002552137  decreased coverage  0.00645782  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_1151  CDS  NC_011992  1209596  1212310  2715  heavy metal translocating P-type ATPase  YP_002552624  decreased coverage  0.0071597  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_1212  CDS  NC_011992  1274541  1275167  627  protein of unknown function DUF161  YP_002552679  decreased coverage  0.00200303  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_1213  CDS  NC_011992  1275315  1275734  420  hypothetical protein  YP_002552680  decreased coverage  0.00326855  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_1391  CDS  NC_011992  1456054  1457739  1686  30S ribosomal protein S1  YP_002552855  decreased coverage  0.00553115  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_1463  CDS  NC_011992  1535146  1536453  1308  outer membrane efflux protein  YP_002552925  decreased coverage  0.00099491  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_2157  CDS  NC_011992  2303738  2304019  282  addiction module toxin, RelE/StbE family  YP_002553606  decreased coverage  5.41282e-10  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_2336  CDS  NC_011992  2490170  2491375  1206  NnrS family protein  YP_002553773  decreased coverage  0.00114269  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_2607  CDS  NC_011992  2770733  2771659  927  inner-membrane translocator  YP_002554042  decreased coverage  0.00528539  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_2658  CDS  NC_011992  2821677  2822579  903  binding-protein-dependent transport systems inner membrane component  YP_002554093  decreased coverage  0.00312349  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_2659  CDS  NC_011992  2822593  2823888  1296  extracellular solute-binding protein family 1  YP_002554094  decreased coverage  0.00136924  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_2960  CDS  NC_011992  3149346  3150899  1554  O-antigen polymerase  YP_002554393  decreased coverage  0.00194737  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_2975  CDS  NC_011992  3167326  3168555  1230  cell division protein FtsZ  YP_002554408  decreased coverage  0.00368493  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_2976  CDS  NC_011992  3168718  3169947  1230  cell division protein FtsA  YP_002554409  decreased coverage  0.000486153  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_2977  CDS  NC_011992  3169965  3170798  834  cell division protein FtsQ  YP_002554410  decreased coverage  0.00192048  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_3257  CDS  NC_011992  3481647  3482858  1212  benzoate transporter  YP_002554686  decreased coverage  0.00676766  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_3324  CDS  NC_011992  3550566  3551552  987  hypothetical protein  YP_002554753  decreased coverage  0.0025587  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_3370  CDS  NC_011992  3607990  3608676  687  transcriptional regulator, TetR family  YP_002554797  decreased coverage  0.0063882  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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Dtpsy_3371  CDS  NC_011992  3608673  3610127  1455  RND efflux system, outer membrane lipoprotein, NodT family  YP_002554798  decreased coverage  0.00556392  n/a    Acidovorax ebreus TPSY  Bacteria 
 
 
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