Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2607 |
Symbol | |
ID | 7384276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 2770733 |
End bp | 2771659 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643655915 |
Product | inner-membrane translocator |
Protein accession | YP_002554042 |
Protein GI | 222111778 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00528539 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGATC TCATACCCCA GCTGGTACAA CAGCTGTTCA ATGGTCTTTC GCTGGGCGCC ATCTACGCGC TGATCGCGAT CGGCTACACG ATGGTCTACG GCATCATCGG AATGATCAAC TTCGCCCATG GCGACATCTA CATGATCGGC GCCTACATCG GCCTGGTCAC GCTGTCGGCC GTCGGCGTGC AGAGTGGCCT GCCGGTGTGG GCGATCATCG CCCTGATGCT GGTGGTAGCG GTGGCCATCA CGGGCGTCTA CGGCTTCGTG GTGGAGCAGG TGGCCTACAA GCCGCTGCGC AGCAGCCCGC GCCTGGTGGC ACTGATTTCG GCCATCGGCA TGTCCATCTT CCTGCAGAAC TGGGTGGCGC TGGGCCAGGG CGCGCGCGAC ATGGCCGTGC CCTCGCTGAT CCCCGGCGCG CTGCGCTTTG GCAGCGAAGG CGGCTTCGAG GTCTACGTGC CCTACTCGCG CATCCTCATC ATCGCCGTGG CGGTGGTGCT GATGATTGCG CTCACGCTGT ACATCCAGCA CTCGCGCATG GGCCGTGCCT CGCGCGCCTG CTCGCAGGAC ATGCACATGG CCAACCTGCT AGGCATCGAC ACCAACCGCG TGATCTCGTT CACCTTCATC CTGGGCGCCA TGCTGGCGGC CGTGGGCGGC GTGCTGATCG CGCTCGCCGT GGGCAAGCTC AACCCCTTCA TCGGGTTCAT CGCCGGCATC AAGGCGTTCA CGGCGGCCGT CCTCGGGGGC ATCGGCTCCA TTCCCGGCGC CATGCTGGGC GGGGTGATCC TGGGCGTGGC CGAGACCTTC GCCGCCGCCT ACATCTCGTC GGAGTACAAG GACATCGTGG CCTTCGGCCT GCTGGTGCTC ATCCTGCTGG TGCGCCCCAC GGGCCTGCTG GGCAAGCCTG AAGTGGAGAA AGTCTGA
|
Protein sequence | MSDLIPQLVQ QLFNGLSLGA IYALIAIGYT MVYGIIGMIN FAHGDIYMIG AYIGLVTLSA VGVQSGLPVW AIIALMLVVA VAITGVYGFV VEQVAYKPLR SSPRLVALIS AIGMSIFLQN WVALGQGARD MAVPSLIPGA LRFGSEGGFE VYVPYSRILI IAVAVVLMIA LTLYIQHSRM GRASRACSQD MHMANLLGID TNRVISFTFI LGAMLAAVGG VLIALAVGKL NPFIGFIAGI KAFTAAVLGG IGSIPGAMLG GVILGVAETF AAAYISSEYK DIVAFGLLVL ILLVRPTGLL GKPEVEKV
|
| |