| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3257 |
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| Symbol | |
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| ID | 7383816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3481647 |
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| End bp | 3482858 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643656580 |
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| Product | benzoate transporter |
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| Protein accession | YP_002554686 |
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| Protein GI | 222112422 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
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| TIGRFAM ID | [TIGR00843] benzoate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00676766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACAAT CCGCCGCCAT GCAGTTTTTC AAAGACCTGA GTCTGTCCGC CTTCACCGCC
GGTTTCGTGG CTGTGCTGGT AGGGTTCACC AGTTCGGTCG CCATCGTGTT CCAGGCGGCG
CAGGCGTTCG GGGCGACGCC CGAGCAGATC ACCTCCTGGA TGTGGGCGCT GGGCCTGGGC
ATGGGGCTGT GCTCGCTGAT TCCCTCGCTC ATCCTGCGCC AGCCGGTCAT GGTGGCCTGG
TCCACGCCCG GTGCAGCGGT GCTCGCCACC GCCGGCCTGG CCGGGAGCTT CAGCATGGGC
GAGGCGGTCG GCGCCTTCAT GGTGTGCGCC TTGCTCATCA CCCTGGCCGG AGTGACGGGT
TGGTTCGAGC GCGTGATGAA CCGTATTCCC ATGGAACTGG CGTCGGCGCT GCTGGCTGGC
GTGCTGGCGC GCTTTGGCAT GCAGGCCTTC GCAGCCGTGC AGACCGCGCT GCCGCTGGTG
CTGGTCATGC TGGCGTCCTA CTTGTTTGCA CGGCGGCTGC TGCCCCGCTA TGCGGTTGTG
CTCACACTGG TGGCAGGCGT TGCCTGGGCC GCAGGCAATG GCCAGATGCG CTGGTCCGCG
GTGCACTGGG CGCTGGCCAC ACCGGTCTTC ACCGCGCCGC AGTTCAGCCT GCAGGCGCTC
ATGAGCCTGG CGCTGCCGCT GTTCATCGTG ACCATGGCGT CGCAGAACCT TCCGGGTGTG
GCCGTCATGC GGGCCACCGG ATACCAACTG CCGGTGTCGC GGCTGATCAC CCTGACGGGC
CTGACCACCC TGGTGCTGGC ACCGTTCGGC GCCTTCGCCC TCAACTTCAG CGCCATCACC
GCAGCGATCT GCATGGGGCC CGAGGCGCAC CCCGACCGCG CGCGGCGGTA CACCGCCGCC
GCTTCGTGCG GGCTGCTGTA CATCGCAGTG GGCATCTTTG GTGCGGTGGT CACGGGGCTG
CTGACGGCGT TTCCACAGGA GCTGGTGGTG GCCATCGCTG GGCTGGCGCT GCTGGGCGCC
ATTGGAGGAG GGCTGGCGTC TGCGCTGCAG GCCGAAGCGC ACCGGGAGGC GGCGTTGATC
ACTTTTCTGG TGACGTTGAG CGGTGTGACC ATAGCCGGGA TCGGATCGGC GTTTTGGGGG
GTGGTCGCCG GCAGCATCGC GCTATTTGTG CAACAGTATG GACGCCCGCG CGCGCCACAG
GCGCCGCGCT AG
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| Protein sequence | MPQSAAMQFF KDLSLSAFTA GFVAVLVGFT SSVAIVFQAA QAFGATPEQI TSWMWALGLG
MGLCSLIPSL ILRQPVMVAW STPGAAVLAT AGLAGSFSMG EAVGAFMVCA LLITLAGVTG
WFERVMNRIP MELASALLAG VLARFGMQAF AAVQTALPLV LVMLASYLFA RRLLPRYAVV
LTLVAGVAWA AGNGQMRWSA VHWALATPVF TAPQFSLQAL MSLALPLFIV TMASQNLPGV
AVMRATGYQL PVSRLITLTG LTTLVLAPFG AFALNFSAIT AAICMGPEAH PDRARRYTAA
ASCGLLYIAV GIFGAVVTGL LTAFPQELVV AIAGLALLGA IGGGLASALQ AEAHREAALI
TFLVTLSGVT IAGIGSAFWG VVAGSIALFV QQYGRPRAPQ APR
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