Gene Dtpsy_1463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1463 
Symbol 
ID7385105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp1535146 
End bp1536453 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content74% 
IMG OID643654780 
Productouter membrane efflux protein 
Protein accessionYP_002552925 
Protein GI222110661 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00099491 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACGCG CCACTGTCCG TTGCCTCACG GTGCTGGCCT GCGCCGTTTC GTTGGCCTGC 
GGCGCGCGCG CCCAGGAGAT GCCCAGGGCG GTACTGCCGC CGCCCGCCAC CGTGCAGGAA
GTCCTTGTGC AACTGCCCCA GGTGCGCGCT GCCGGTGCCG GCCTGGCACT GGCGCAAGCG
CGTGGCGAAC GCCTGCGCGC GGGCCCGCAC GACTGGGTAG CCAAGGCAGG TGCCAACCAG
CGCCGTGAGC AGGGCGGCAC GCGCTACGCG GAAACCGAGC TGGGCCTGGA AACAGGCATG
CGCTGGCCCG GCAAGGTGGC GGCCGACCAC CAACTGGGCG CGGCCGTTGA ACAGGTGGCC
GTGCTTGCCC AGGCCGACGC CTGGCATGAG GCCGCGCGCA CCCTGCTGGC GGACTGGTTC
GAGGCCCTGC GCGCCGCGCG CACGGACCAA CTGCTGCAGG CCCAGGAGGC GCTGATGGCG
CGCACCCTGG CCGCCACGCA GCGCCGGGTG GATCTGGGCG AGGCCGCCAC GCTCGAATTG
CTCGCCACCC AGGCAGAGCA TGCCCGCGTG AAGGCCCAGG CTGCGCGCGC CGCTGCCCAG
GCCATGCTCG TGCGCCAGAG CCTGCTGCGC CGCTACCCGG GCTTGCCGGA CCCGGCCAGC
CTGCTGCCGC CAGCCGATGC CCCCTGGCCT GCCGAGGTGC CAGAGGGTGG TACAGACGGC
CAGGACCCTG CCGCCGCCTG GGTTGCGCGC ATTCTTGAGG ACAACCACGA ACTGGAGCTG
GCCGAGGCGC AGGCCGGGCA AACACGCCTG CAAGCCGAGC GCATGCAGCT GGAGCGGACC
CCCGACCCCA CGGTGGGCGT GCGCGCCACG CGCGAGCGCG GTGGGCAAGA GCATGTGCTG
GGGGTCTACG TCTCCCTGCC CCTGGGAAGT GCAGGGCGCC GTGCCGACGC GCAGGCTGCC
TTGGCGCAGG CCGACGTGGC GCAGCAGGAG CTGGCGCGCA CACGCCAGCG CGTCGAGGCC
GAGGCGTGGC GCGTGGTTGG CGAAGCGGCA CAGGCGCGCG CCACGCTGGC CCAGCAGCGC
CAGGCCCTGG CCTACAGTGA GAAAAGCGCG GCGCTGCAGG CGCGCGCCTA CGCACTGGGG
GAGAGTGGCT TGGGCGACTG GTTGCTGGCC CAGCGCGGTG CCCTCGATGC CCGCCTGGCG
GCGGAGACGG CTGCCCTGGA GGCCCAGCAG GCGCAAGCTC GGGTGCTGCT GGATGCGCAC
CGCATATGGA CGCCCCCGGG CCACGGCACA CCGCATGCCG AGCACTGA
 
Protein sequence
MRRATVRCLT VLACAVSLAC GARAQEMPRA VLPPPATVQE VLVQLPQVRA AGAGLALAQA 
RGERLRAGPH DWVAKAGANQ RREQGGTRYA ETELGLETGM RWPGKVAADH QLGAAVEQVA
VLAQADAWHE AARTLLADWF EALRAARTDQ LLQAQEALMA RTLAATQRRV DLGEAATLEL
LATQAEHARV KAQAARAAAQ AMLVRQSLLR RYPGLPDPAS LLPPADAPWP AEVPEGGTDG
QDPAAAWVAR ILEDNHELEL AEAQAGQTRL QAERMQLERT PDPTVGVRAT RERGGQEHVL
GVYVSLPLGS AGRRADAQAA LAQADVAQQE LARTRQRVEA EAWRVVGEAA QARATLAQQR
QALAYSEKSA ALQARAYALG ESGLGDWLLA QRGALDARLA AETAALEAQQ AQARVLLDAH
RIWTPPGHGT PHAEH