Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1463 |
Symbol | |
ID | 7385105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1535146 |
End bp | 1536453 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643654780 |
Product | outer membrane efflux protein |
Protein accession | YP_002552925 |
Protein GI | 222110661 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00099491 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACGCG CCACTGTCCG TTGCCTCACG GTGCTGGCCT GCGCCGTTTC GTTGGCCTGC GGCGCGCGCG CCCAGGAGAT GCCCAGGGCG GTACTGCCGC CGCCCGCCAC CGTGCAGGAA GTCCTTGTGC AACTGCCCCA GGTGCGCGCT GCCGGTGCCG GCCTGGCACT GGCGCAAGCG CGTGGCGAAC GCCTGCGCGC GGGCCCGCAC GACTGGGTAG CCAAGGCAGG TGCCAACCAG CGCCGTGAGC AGGGCGGCAC GCGCTACGCG GAAACCGAGC TGGGCCTGGA AACAGGCATG CGCTGGCCCG GCAAGGTGGC GGCCGACCAC CAACTGGGCG CGGCCGTTGA ACAGGTGGCC GTGCTTGCCC AGGCCGACGC CTGGCATGAG GCCGCGCGCA CCCTGCTGGC GGACTGGTTC GAGGCCCTGC GCGCCGCGCG CACGGACCAA CTGCTGCAGG CCCAGGAGGC GCTGATGGCG CGCACCCTGG CCGCCACGCA GCGCCGGGTG GATCTGGGCG AGGCCGCCAC GCTCGAATTG CTCGCCACCC AGGCAGAGCA TGCCCGCGTG AAGGCCCAGG CTGCGCGCGC CGCTGCCCAG GCCATGCTCG TGCGCCAGAG CCTGCTGCGC CGCTACCCGG GCTTGCCGGA CCCGGCCAGC CTGCTGCCGC CAGCCGATGC CCCCTGGCCT GCCGAGGTGC CAGAGGGTGG TACAGACGGC CAGGACCCTG CCGCCGCCTG GGTTGCGCGC ATTCTTGAGG ACAACCACGA ACTGGAGCTG GCCGAGGCGC AGGCCGGGCA AACACGCCTG CAAGCCGAGC GCATGCAGCT GGAGCGGACC CCCGACCCCA CGGTGGGCGT GCGCGCCACG CGCGAGCGCG GTGGGCAAGA GCATGTGCTG GGGGTCTACG TCTCCCTGCC CCTGGGAAGT GCAGGGCGCC GTGCCGACGC GCAGGCTGCC TTGGCGCAGG CCGACGTGGC GCAGCAGGAG CTGGCGCGCA CACGCCAGCG CGTCGAGGCC GAGGCGTGGC GCGTGGTTGG CGAAGCGGCA CAGGCGCGCG CCACGCTGGC CCAGCAGCGC CAGGCCCTGG CCTACAGTGA GAAAAGCGCG GCGCTGCAGG CGCGCGCCTA CGCACTGGGG GAGAGTGGCT TGGGCGACTG GTTGCTGGCC CAGCGCGGTG CCCTCGATGC CCGCCTGGCG GCGGAGACGG CTGCCCTGGA GGCCCAGCAG GCGCAAGCTC GGGTGCTGCT GGATGCGCAC CGCATATGGA CGCCCCCGGG CCACGGCACA CCGCATGCCG AGCACTGA
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Protein sequence | MRRATVRCLT VLACAVSLAC GARAQEMPRA VLPPPATVQE VLVQLPQVRA AGAGLALAQA RGERLRAGPH DWVAKAGANQ RREQGGTRYA ETELGLETGM RWPGKVAADH QLGAAVEQVA VLAQADAWHE AARTLLADWF EALRAARTDQ LLQAQEALMA RTLAATQRRV DLGEAATLEL LATQAEHARV KAQAARAAAQ AMLVRQSLLR RYPGLPDPAS LLPPADAPWP AEVPEGGTDG QDPAAAWVAR ILEDNHELEL AEAQAGQTRL QAERMQLERT PDPTVGVRAT RERGGQEHVL GVYVSLPLGS AGRRADAQAA LAQADVAQQE LARTRQRVEA EAWRVVGEAA QARATLAQQR QALAYSEKSA ALQARAYALG ESGLGDWLLA QRGALDARLA AETAALEAQQ AQARVLLDAH RIWTPPGHGT PHAEH
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