Gene Dtpsy_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1212 
Symbol 
ID7383114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand- 
Start bp1274541 
End bp1275167 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content69% 
IMG OID643654531 
Productprotein of unknown function DUF161 
Protein accessionYP_002552679 
Protein GI222110415 
COG category[S] Function unknown 
COG ID[COG1284] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00200303 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACCA CCACCGCCAA CGCCGCTCCC GCCATGGTCC CGCACACCCG CACCGAAGAC 
GCCGTGGCGA TTGGCGTCGG CGTGACGCTG ATCTCCGTGG GCGTGGCCTT CCTCGCCAGC 
GCCGGGCTGC TCACCGGCGG CATGGCGGGG CTGGCCTTCG TGCTGCACTA CGCCACGGGC 
ATCGGCTTCG GCAAGCTGTT CTTCGCGCTC AACCTGCCGT TCTACTGGCT GGCGCTGCGC 
AAGCTGGGCC TGGCCTTCAC GCTCAAGACC TTCGCGGCCG TGGCGCTGCT GTCGGTGCTG 
TCGGAGCTGC AGTCGCAGTT CCTGCAGATC AGCGAACTGC AGCCGCTGTA TGCGGCCATC 
ACCGGCGGGC TGATCATGGG TATGGGCTTT TTGGTGCTGT TCCGCCACCG CTGCAGCCTG 
GGGGGCGTGG GCATCATGGC GCTGTACCTG CAGGACCGCT TCGGCTGGCG CGCCGGCAAG 
GTGCAGATGG CCGTGGACTG CTGCATCGTG CTGGCGGCGC TGGTCACAGT GGAGCCGCTG 
CGCGTGCTGT GGTCGGTCAT CGGCGCCGTG GCGCTCAACC TGGTGCTGGC CATGAACCAC 
CGGCCAGGGC GCTACATGGC GGTCTGA
 
Protein sequence
MSTTTANAAP AMVPHTRTED AVAIGVGVTL ISVGVAFLAS AGLLTGGMAG LAFVLHYATG 
IGFGKLFFAL NLPFYWLALR KLGLAFTLKT FAAVALLSVL SELQSQFLQI SELQPLYAAI 
TGGLIMGMGF LVLFRHRCSL GGVGIMALYL QDRFGWRAGK VQMAVDCCIV LAALVTVEPL 
RVLWSVIGAV ALNLVLAMNH RPGRYMAV