8 homologs were found in PanDaTox collection
for query gene Vapar_3693 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012791  Vapar_3693  putative signal peptide protein  100 
 
 
107 aa  211  2.9999999999999995e-54  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4502  putative signal peptide protein  41.13 
 
 
142 aa  62  0.000000003  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.22227 
 
 
-
 
NC_010002  Daci_0534  hypothetical protein  35.83 
 
 
129 aa  52.4  0.000002  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00292874 
 
 
-
 
NC_008782  Ajs_3882  hypothetical protein  35.51 
 
 
138 aa  50.1  0.00001  Acidovorax sp. JS42  Bacteria  normal  0.107973  normal  0.566959 
 
 
-
 
NC_011992  Dtpsy_3155  hypothetical protein  37.31 
 
 
138 aa  48.5  0.00003  Acidovorax ebreus TPSY  Bacteria  normal  0.440181  n/a   
 
 
-
 
NC_012791  Vapar_4790  putative signal peptide protein  39.68 
 
 
125 aa  45.8  0.0002  Variovorax paradoxus S110  Bacteria  normal  0.333418  n/a   
 
 
-
 
NC_012792  Vapar_6087  putative signal peptide protein  61.9 
 
 
94 aa  45.8  0.0002  Variovorax paradoxus S110  Bacteria  normal  0.832746  n/a   
 
 
-
 
NC_012791  Vapar_1344  hypothetical protein  61.11 
 
 
70 aa  41.6  0.004  Variovorax paradoxus S110  Bacteria  normal  0.0953206  n/a   
 
 
-
 
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