4 homologs were found in PanDaTox collection
for query gene Vapar_6087 on replicon NC_012792
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012792  Vapar_6087  putative signal peptide protein  100 
 
 
94 aa  180  5.0000000000000004e-45  Variovorax paradoxus S110  Bacteria  normal  0.832746  n/a   
 
 
-
 
NC_012791  Vapar_3693  putative signal peptide protein  61.9 
 
 
107 aa  47.8  0.00005  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0534  hypothetical protein  66.67 
 
 
129 aa  46.6  0.0001  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00292874 
 
 
-
 
NC_012791  Vapar_4790  putative signal peptide protein  33.33 
 
 
125 aa  42.4  0.002  Variovorax paradoxus S110  Bacteria  normal  0.333418  n/a   
 
 
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