Gene Daci_0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0534 
Symbol 
ID5746077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp588095 
End bp588484 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content74% 
IMG OID641295603 
Producthypothetical protein 
Protein accessionYP_001561565 
Protein GI160895983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00292874 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTTCCC TTCGCACACC GCTGATCGCC GCCACCCTGG CCCTGGCCGG ATGGGCCGGC 
ACCGCGCAGG CCCAGGCCAA CGTGACCTAT GCGGCGCCGG GCGCCGCCAT CTCGGTCCAG
TTCGGCGCGC CGCCTCCCAT GCGCTACGAG GCGGTTCCTG CACCGCGCCG CGGCTACGTC
TGGGCACCCG GCTACTGGCG CCCGCAGGGC CACCGCCATG CCTGGGTGGC CGGCCACTGG
GTCAAGGCGC GTCCCGGCTA TGTGTACCGC CAGCCCGTGT GGTCGCAGCA CGGTGGCCGC
TGGGGCTACG CACCCGGCCG CTGGGACCGT GACCGCGACG GCGTGCCGGA CCGCCATGAC
CGCCGCCCCA ACAACCCCTA CCGCCATTGA
 
Protein sequence
MISLRTPLIA ATLALAGWAG TAQAQANVTY AAPGAAISVQ FGAPPPMRYE AVPAPRRGYV 
WAPGYWRPQG HRHAWVAGHW VKARPGYVYR QPVWSQHGGR WGYAPGRWDR DRDGVPDRHD
RRPNNPYRH