10 homologs were found in PanDaTox collection
for query gene Vapar_2697 on replicon NC_012791
Organism: Variovorax paradoxus S110



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012791  Vapar_2697  transcriptional regulator, XRE family  100 
 
 		 126 aa  262  2e-69  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008042  TM1040_3842  XRE family transcriptional regulator  37.5 
 
 		 100 aa  67.8  0.00000000005  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.039108 
 
 
-
 
NC_007641  Rru_B0041  XRE family transcriptional regulator  36.78 
 
 		 103 aa  65.9  0.0000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0601255  n/a   
 
 
-
 
NC_010510  Mrad2831_5908  XRE family transcriptional regulator  36.47 
 
 		 108 aa  65.1  0.0000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.209414  hitchhiker  0.00928486 
 
 
-
 
NC_011887  Mnod_8001  transcriptional regulator, XRE family  31.25 
 
 		 118 aa  65.1  0.0000000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_1273  XRE family transcriptional regulator  33.7 
 
 		 103 aa  63.2  0.000000001  Methylobacterium sp. 4-46  Bacteria  normal  0.31863  normal  0.4589 
 
 
-
 
NC_010172  Mext_1160  helix-turn-helix domain-containing protein  31.82 
 
 		 98 aa  61.6  0.000000004  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.476577 
 
 
-
 
NC_011757  Mchl_1320  transcriptional regulator, XRE family  31.82 
 
 		 98 aa  61.6  0.000000004  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_0269  transcriptional regulator, XRE family  32.95 
 
 		 98 aa  60.1  0.000000009  Methylobacterium populi BJ001  Bacteria  normal  0.75294  normal  1 
 
 
-
 
NC_007777  Francci3_0889  XRE family transcriptional regulator  30.99 
 
 		 81 aa  40.8  0.007  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>