13 homologs were found in PanDaTox collection
for query gene Mnod_8001 on replicon NC_011887
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011887  Mnod_8001  transcriptional regulator, XRE family  100 
 
 		 118 aa  238  1e-62  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
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NC_010511  M446_1273  XRE family transcriptional regulator  87 
 
 		 103 aa  181  2.0000000000000003e-45  Methylobacterium sp. 4-46  Bacteria  normal  0.31863  normal  0.4589 
 
 
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NC_010510  Mrad2831_5908  XRE family transcriptional regulator  84.54 
 
 		 108 aa  168  2e-41  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.209414  hitchhiker  0.00928486 
 
 
-
 
NC_010172  Mext_1160  helix-turn-helix domain-containing protein  81.44 
 
 		 98 aa  167  4e-41  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.476577 
 
 
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NC_011757  Mchl_1320  transcriptional regulator, XRE family  81.44 
 
 		 98 aa  167  4e-41  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_0269  transcriptional regulator, XRE family  81.44 
 
 		 98 aa  166  1e-40  Methylobacterium populi BJ001  Bacteria  normal  0.75294  normal  1 
 
 
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NC_007641  Rru_B0041  XRE family transcriptional regulator  56.7 
 
 		 103 aa  124  6e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0601255  n/a   
 
 
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NC_008042  TM1040_3842  XRE family transcriptional regulator  56.82 
 
 		 100 aa  107  8.000000000000001e-23  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.039108 
 
 
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NC_012791  Vapar_2697  transcriptional regulator, XRE family  31.25 
 
 		 126 aa  64.7  0.0000000004  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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NC_013165  Shel_06770  predicted transcriptional regulator  36.62 
 
 		 106 aa  49.7  0.00002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
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NC_009253  Dred_0875  XRE family transcriptional regulator  37.29 
 
 		 77 aa  40.8  0.006  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000023095  n/a   
 
 
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NC_010505  Mrad2831_0066  XRE family transcriptional regulator  41.51 
 
 		 146 aa  40.4  0.008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0319384  normal  1 
 
 
-
 
NC_009050  Rsph17029_3349  XRE family transcriptional regulator  35.59 
 
 		 115 aa  40.4  0.009  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.185008 
 
 
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