16 homologs were found in PanDaTox collection
for query gene VSAL_II0344 on replicon NC_011313
Organism: Aliivibrio salmonicida LFI1238



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011313  VSAL_II0344  putative HTH-type transcriptional regulator  100 
 
 		 318 aa  642    Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0939644  n/a   
 
 
-
 
NC_009783  VIBHAR_02618  hypothetical protein  30.65 
 
 		 326 aa  139  4.999999999999999e-32  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_02617  hypothetical protein  29.43 
 
 		 315 aa  139  8.999999999999999e-32  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_02615  hypothetical protein  40.82 
 
 		 142 aa  79  0.00000000000009  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011313  VSAL_II0343  putative HTH-type transcriptional regulator  45.07 
 
 		 85 aa  66.2  0.0000000006  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.254339  n/a   
 
 
-
 
NC_011313  VSAL_II0342  hypothetical protein  33 
 
 		 109 aa  56.2  0.0000006  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0737261  n/a   
 
 
-
 
NC_011313  VSAL_II0362  hypothetical protein  42.62 
 
 		 296 aa  49.7  0.00007  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0710917  n/a   
 
 
-
 
NC_009052  Sbal_2126  XRE family transcriptional regulator  40 
 
 		 326 aa  48.9  0.0001  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_2233  XRE family transcriptional regulator  40 
 
 		 326 aa  48.9  0.0001  Shewanella baltica OS185  Bacteria  normal  0.383129  n/a   
 
 
-
 
NC_009997  Sbal195_2349  XRE family transcriptional regulator  40 
 
 		 326 aa  48.9  0.0001  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011663  Sbal223_2114  transcriptional regulator, XRE family  40 
 
 		 322 aa  48.9  0.0001  Shewanella baltica OS223  Bacteria  normal  0.092707  normal  1 
 
 
-
 
NC_009901  Spea_2712  hypothetical protein  38.46 
 
 		 309 aa  47.8  0.0003  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_009513  Lreu_1668  XRE family transcriptional regulator  33.78 
 
 		 137 aa  46.6  0.0005  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00903838  n/a   
 
 
-
 
NC_008577  Shewana3_2202  XRE family transcriptional regulator  42.55 
 
 		 293 aa  44.7  0.002  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007644  Moth_0239  XRE family transcriptional regulator  32.81 
 
 		 115 aa  43.1  0.006  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.0000283783  normal  1 
 
 
-
 
NC_009783  VIBHAR_01640  hypothetical protein  26 
 
 		 294 aa  42.7  0.007  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>