Gene Shew185_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2233 
Symbol 
ID5371995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2658596 
End bp2659576 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content40% 
IMG OID640830448 
ProductXRE family transcriptional regulator 
Protein accessionYP_001366435 
Protein GI153000754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.383129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGCG ATATGATTTG TACACCTATC TCCTATCAAA ACAAAACAAG TGCACAGACA 
TTCTCCAATT TCTTAAAACA CACCCGCACA GAGAATAACC TTTCCCAAGA AGATTTATGT
GGTTTGCTCA GGCAAAAAAG TTGTCTGTTC GATACCTTAG ATTCCATCAC GATTAGCCGT
TGGGAGCGAG GGGTTAACAT CCCATCCCTT GCTAAACAGT CTGAAATTGT TGAAATATTT
GGCTCTGAAC TCTTTGATAT TTATCGGGAG GATAAAAAGT TTATCAACGA AGGCTTAGCC
CTGATTAACC TTTTTGAGTC CAACATAGAA CGCAGTGACC ATCCGTACTA CCGCAATACG
CCTTATCGTG TCGAATTTAT CGAGAGCCAC CATCATAACT TCATGGCGTT ACTGCAACTC
AGTTTGGTTT ATGAAAGTAA TCCGCGTTTA TCCTTTGTGA GCCGTAACTT ATCTCAACCG
TTTTTCCATG GTCTGTCATT AGTTGTTGCG TTTAGCTCGG GCGATCAGAT AGTCGGACAT
AGTCTGTTTT GTCGCACTCA GGGCAAAATC GCCCTCGAAT TTATGAATGA TGAGGTGGAC
TTATTCGAGG TGATTAACCA TAACAGCCAA GCCTTACCAG ATACCTTGAT GGTGTTCTCA
TCTTTTGGTG TGACTCCCTA TATTGAAAAC TACATGATGT CTGTTTATCT CAATGAATTG
GCTGCGAGTC GCTCACTCAA GTTTTTAAGT TTTAATATCT GTGATGAGTC ATTAAAACGA
AAGTTAACGC AATTTAAGTT ACCCATTTTC AAAGTGAGAA CGATAGAAAG TTGCTGCAAA
CCGATAAAAA ACTATTCGTT TTTTTCCAGT CGCACAGAGG TGATGGCAAA TCGTAATCTA
CTCAAGCTTT CCGTCATTCC TTCATCAAAA TCCCAAACGA TCGATCCCAT TTTCTTCATG
CAGTTAGAGA CCCCTATATG A
 
Protein sequence
MERDMICTPI SYQNKTSAQT FSNFLKHTRT ENNLSQEDLC GLLRQKSCLF DTLDSITISR 
WERGVNIPSL AKQSEIVEIF GSELFDIYRE DKKFINEGLA LINLFESNIE RSDHPYYRNT
PYRVEFIESH HHNFMALLQL SLVYESNPRL SFVSRNLSQP FFHGLSLVVA FSSGDQIVGH
SLFCRTQGKI ALEFMNDEVD LFEVINHNSQ ALPDTLMVFS SFGVTPYIEN YMMSVYLNEL
AASRSLKFLS FNICDESLKR KLTQFKLPIF KVRTIESCCK PIKNYSFFSS RTEVMANRNL
LKLSVIPSSK SQTIDPIFFM QLETPI