23 homologs were found in PanDaTox collection
for query gene VSAL_II0343 on replicon NC_011313
Organism: Aliivibrio salmonicida LFI1238



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011313  VSAL_II0343  putative HTH-type transcriptional regulator  100 
 
 		 85 aa  174  3e-43  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.254339  n/a   
 
 
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NC_009783  VIBHAR_02617  hypothetical protein  48.72 
 
 		 315 aa  72  0.000000000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
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NC_009783  VIBHAR_02615  hypothetical protein  50.67 
 
 		 142 aa  71.6  0.000000000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
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NC_011313  VSAL_II0344  putative HTH-type transcriptional regulator  45.07 
 
 		 318 aa  66.2  0.0000000001  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0939644  n/a   
 
 
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NC_009783  VIBHAR_02618  hypothetical protein  41.25 
 
 		 326 aa  64.7  0.0000000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_2114  transcriptional regulator, XRE family  43.28 
 
 		 322 aa  59.7  0.00000001  Shewanella baltica OS223  Bacteria  normal  0.092707  normal  1 
 
 
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NC_009052  Sbal_2126  XRE family transcriptional regulator  43.28 
 
 		 326 aa  59.7  0.00000001  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
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NC_009665  Shew185_2233  XRE family transcriptional regulator  43.28 
 
 		 326 aa  59.3  0.00000002  Shewanella baltica OS185  Bacteria  normal  0.383129  n/a   
 
 
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NC_009997  Sbal195_2349  XRE family transcriptional regulator  43.28 
 
 		 326 aa  59.3  0.00000002  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011313  VSAL_II0362  hypothetical protein  38.67 
 
 		 296 aa  59.3  0.00000002  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0710917  n/a   
 
 
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NC_009831  Ssed_0709  hypothetical protein  43.28 
 
 		 321 aa  55.8  0.0000002  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0231385  hitchhiker  0.000131082 
 
 
-
 
NC_008322  Shewmr7_3394  hypothetical protein  35.06 
 
 		 310 aa  54.7  0.0000004  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_2712  hypothetical protein  39.19 
 
 		 309 aa  55.1  0.0000004  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_008322  Shewmr7_2307  hypothetical protein  34.38 
 
 		 318 aa  48.9  0.00002  Shewanella sp. MR-7  Bacteria  normal  0.71973  normal  0.0278628 
 
 
-
 
NC_008577  Shewana3_2202  XRE family transcriptional regulator  32.14 
 
 		 293 aa  48.1  0.00004  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009783  VIBHAR_01640  hypothetical protein  39.34 
 
 		 294 aa  45.4  0.0002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_2231  hypothetical protein  33.8 
 
 		 311 aa  45.1  0.0003  Shewanella sp. MR-4  Bacteria  normal  0.264397  normal  0.0403681 
 
 
-
 
NC_007651  BTH_I2733  helix-turn-helix domain-containing protein  33.82 
 
 		 115 aa  44.7  0.0005  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.00000416248  n/a   
 
 
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NC_012856  Rpic12D_2696  transcriptional regulator, XRE family  39.06 
 
 		 117 aa  43.1  0.001  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007530  GBAA_4125  prophage LambdaBa02, DNA-binding protein  31.51 
 
 		 75 aa  40.4  0.008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.893479  n/a   
 
 
-
 
NC_011658  BCAH187_A4027  prophage LambdaBa02, DNA-binding protein  31.51 
 
 		 75 aa  40.4  0.008  Bacillus cereus AH187  Bacteria  normal  0.571082  n/a   
 
 
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NC_005945  BAS3830  prophage LambdaBa02, DNA-binding protein  31.51 
 
 		 75 aa  40.4  0.008  Bacillus anthracis str. Sterne  Bacteria  normal  0.0176274  n/a   
 
 
-
 
NC_013204  Elen_1666  transcriptional regulator, XRE family  37.5 
 
 		 205 aa  40.4  0.009  Eggerthella lenta DSM 2243  Bacteria  normal  0.130033  hitchhiker  0.00224482 
 
 
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