| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0344 |
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| Symbol | |
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| ID | 6961798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 385987 |
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| End bp | 386943 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 643381643 |
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| Product | putative HTH-type transcriptional regulator |
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| Protein accession | YP_002264685 |
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| Protein GI | 209809147 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0939644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGATAA ATATGTTTTC TGAATGCATT AAAGAAATAC GTAAAAAACA AAACTTAACC
CAGTTAGAGT TCTCAACACA TTTAAATTTG ATAGATGCTG AATTCCACGC ATTAGACGCC
GTTACAGTCA GTCGTTGGGA ACGAGGAATT ACAAAGCCAT CACTGAAGAA GTGCATCCGC
ATTTTAAGAT TGTTTGATTA TGTCCTTAAA TACTTCTTAT TGAATAATGA TTATGCCTCT
GATATGTCAG CCTTAGATAC AATAATGGAT AAACGATTTA ATGATAGGCT CCTAAAGTTA
CATAATATCC AAAAATATTA TTATAATAAT GTCAATCATG TAGAGTTCAA AATAAAAACA
ATACCAAAAG ATCAACGAAT GATAATAAAT TTATTATCAA ATTTATATAA TCATTTAGAT
ATTGAAAAAG ATTCATTATT TAATATCGAT TTATACCTAT ACCAAACAAG AAACAAACTA
ATTGGATTAA CGTTTCATAA TAACGATGAC GACCATATAT TAGGTCACTC GATTAGCTTT
TACTTTAATA CTGATGAATT TTTATCACAA ATAAAAAATA ACAAATGTAA AATAGATTAT
ACAAAAAGCA TTGCATATAA AGAAGGGAAA GACATTACAC TTTATAATTG TTCTAGATAT
TCATCTTCAG AAGAATTATT TAAATTTCAA ATAATAAATG ATGTTAGTTT ATTGTGTGAA
AATAGTAGCA TCCAATATTA CTCCATACGA TTAGGATTAA AGATAATGTA TGATTTTCTA
ATCAGTCTTG GCTTCGAACT ATCCTCTTAT CAAAATGAAC ATCCTAAAGG AGAAATATCG
GTAGGAAGAA AAAAATATCG TGATGCAATT TTATCGGTAA AAGTTGAAAA ACTATTATCA
AACGTAGAAT TGATAAATAT ATTAAAAGAG GAAAAAGCAC AAGGCATCTC AGGTTAA
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| Protein sequence | MVINMFSECI KEIRKKQNLT QLEFSTHLNL IDAEFHALDA VTVSRWERGI TKPSLKKCIR
ILRLFDYVLK YFLLNNDYAS DMSALDTIMD KRFNDRLLKL HNIQKYYYNN VNHVEFKIKT
IPKDQRMIIN LLSNLYNHLD IEKDSLFNID LYLYQTRNKL IGLTFHNNDD DHILGHSISF
YFNTDEFLSQ IKNNKCKIDY TKSIAYKEGK DITLYNCSRY SSSEELFKFQ IINDVSLLCE
NSSIQYYSIR LGLKIMYDFL ISLGFELSSY QNEHPKGEIS VGRKKYRDAI LSVKVEKLLS
NVELINILKE EKAQGISG
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