10 homologs were found in PanDaTox collection
for query gene VSAL_I1222 on replicon NC_011312
Organism: Aliivibrio salmonicida LFI1238



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011312  VSAL_I1222  outer membrane protein  100 
 
 
918 aa  1896    Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0413345  n/a   
 
 
-
 
NC_013730  Slin_1741  hypothetical protein  25.41 
 
 
977 aa  63.2  0.00000002  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1737  WD-40-like beta propeller repeat-containing protein  24.81 
 
 
1021 aa  62.4  0.00000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.349792  n/a   
 
 
-
 
NC_011145  AnaeK_2102  WD40 domain protein beta Propeller  24.81 
 
 
1078 aa  60.5  0.0000001  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2060  WD40 domain-containing protein  25.67 
 
 
1206 aa  58.5  0.0000006  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.456517  normal  0.995925 
 
 
-
 
NC_011891  A2cp1_2193  WD40 domain protein beta Propeller  24.44 
 
 
1077 aa  56.6  0.000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5623  WD40 domain protein beta Propeller  24.06 
 
 
956 aa  56.2  0.000003  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.101899 
 
 
-
 
NC_011899  Hore_08230  WD40 domain protein beta Propeller  22.27 
 
 
918 aa  45.4  0.005  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2492  peptidase S9B dipeptidylpeptidase IV domain protein  21.83 
 
 
970 aa  45.1  0.007  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0966  peptidase S9B dipeptidylpeptidase IV subunit  23 
 
 
976 aa  44.3  0.01  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000198927  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>