| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_08230 |
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| Symbol | |
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| ID | 7314810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 888656 |
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| End bp | 891412 |
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| Gene Length | 2757 bp |
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| Protein Length | 918 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643611254 |
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| Product | WD40 domain protein beta Propeller |
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| Protein accession | YP_002508575 |
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| Protein GI | 220931667 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTGG GTTATAGAAA ATGCTTATTT TTTTTAGTTA TTTTGTTGAT TATGGTAACT
TCACCGGTCC TGGCTGGTAA ATGGTATACA ATGAAAACTG ACCATTTTAT AATTAATTTT
CAAAAAGATA ATGCTATGGC CGCTTATAAA GTTTCCAGAA TTGCTGAAGA TGTTCATGAT
AAATTGATTA GATTTATGGA ATATGAACCG GTAACAAAGA CATATATAAA CATTTTTGAT
GATGCCGATA TGGCCAATGG TAGTGCTGAT GTTATCTGTT TTAACAGAAT TAATGTGTAT
CTTAGAAAGC CAGATATTTA TTCAGGAATG GTAGGTTACA GTGAAAGCTG GTTGCGTCTT
GTAATTACAC ATGAATATAC CCATATTCTG CATCTTGATA TGAATGAAGG GGCCTCCAGG
TTTTACCGAC ATATATTGGG GAAAATACCT ATATTAACTA CTCCCAATAT ACTTCAACCC
TGGTGGCTTA TTGAAGGTTA TACCACATAT ACTGAAACAA AATTTACAAA CGGGGGGCGG
GGTAAAGGTG ATATTTATTC AATGTATATA AGGACTGCTG CCCTTCAAGA TAAATTATAT
TCGGTTGACA AAGTAAGCGG GAAATATGAC CTTTCTTCCT GGCCTACCGG AGGAATACCG
GTTTACATAT ATGGTTTATC CATTTGCAGG TATATTGCTA AAGAATATGG AGAGGACAAG
CTCGTTGAAA TAAGCCATAA GTTCTGCGAA GAACCCCAGG AAGGAATTAA TAAGGTTATT
GAAAAGGTAT TGGGAATAGA GGTAGATGAA TTATACAAAT CATGGAAGTT TGAACAGAAG
AGAAAAGCTA TAGAATTAAA TGAGAGAATT GAAACAGAAG GCAGGACTGA GATAACGAGG
TTAACTGAGC ATGGTTATTT TACTTTAAAT CCTTCGGTTT CACCTGATGG TAAAAAAGTA
GCCTATTATC ATTATTATAA TAAATTTTCG GCGATTAGAA TATTAACTGA AGATGGAAGA
GATTATCAGC TGGTTCCAGC AATATCATCA TCAGATGGAA ATATAACATG GTCACCGGAT
GGAAAAAAAC TTGTTTACGC TAAACAGGAT GTATATAAAA AAGTATATAA TTATTATGAT
TTATATATGT ATGATTTTAC CACTGACCGG GAGATAAGGT TGACCCGTGG TGAGAGAGCA
TATGCTCCGG TTTTTAAAGA TAATAATACA ATTATATATT TAACCCAGGA TAAAGGTATA
ACCAGTATTA AAAAAATAGA TTTAAAAACC CGGCAGACTT CAACCATATT AAAGGGAAAT
AGTAGCTTTT CATTTTCATC TCTTGATATT TCCCCTGATG GAAATAAAGC TGTGTTGAGT
GTTATGTATA ACAGCAAGAA AGATCTTTAT TTATATTCTT TTGAAGATAA GGTATTAAAA
CCATTGATAG ATGATAACCA TATCGAGGTC TTTCCGGTAT GGTCACCGGA TGGAAAATAT
GTTGTCTTTA GTTCAGATAG AAATGGTAGA TTCAATTTAT ATGCCCTGGA TATGGTTACA
AAAAATCTTT ATCGCATAAC TAATTTATTT ACCGGGGCCT TCAAGCCCAG CTTTAGAAAT
AAAGATGAAA TTGTATTTGT CGGATATTCA TTAGATGGAT ATGACCTTTA TTCAGTAAGG
CTTGACAGGG TGGAATGGAA AAGAGTTGGT AAGTTGAATT TTGTAAATAG AAGACGTATT
ATAAAGATTA AAGAGGAAGA AGATTCTCCT GATTACTGGT TTGAAAAGCT TAAAACTAGT
TATCGGGTCA GGGAATATAG TCCTTTTCCA TCATTATATC CCAAATATAT AATGCCTAAT
TTCAGTTTGA TATACACTTC TGAGGGAACC AGCCTTGATA CAGGTTTTAC TACTTATGGT
AAGGATGCTC TTGAAAAACA TAGCTATTCC ATGAGTTTTA ACTATCACAA TAAATCTCCT
GAGCCGTCCT TTGATTTCCA GTATAGTTAT CAGCCTGGAA CTTTTCTATT ATCACTGACC
ACCAATCAGA GTTTAATAAA AGATGGAGAC TGGGTACGGG AGCGTAATGT AGATATTATG
CTGGGTTATC CGTTAATAAA TAAGTCTTTT TACTACCACC TGTTATTATT AAATTCAGTT
TATCATGATG AATATTGTTA TGACAATAAA GATGTTGATA GTTATACTCT TTATGGCACA
GGTTGGCGAT ATGGAGGGAT TACCGGTAGT GGTCCAGTCC AGAATAGCCT ATACTGGGGT
ATAGATAGTT ACTGGAAAAA AGATAATATA GAAGAATATA AAGTAGAAAT GTCTGCAGAT
AATTATCTGG AATTAAATAA AAAAACTACC CTGGCCGGAC GTTTAATTAT CGGTTATAAC
AAAATTGATG ATTTTTCCCT GGGTCAGGGA AACCTGGTAA GAGCCTTCAG GGAAGAACCA
TTGAAGGGTT CTAAACTGGC AATCTTTAAT TTAGAACTGA GAAAGGAATT GATTAACATT
GAAAGTGGTC CAGGGGTTTA TCCTGTATTC TATGATGACC TCAATGGTAC CCTCTTCTAT
GATTTTGGCT TAACAGGAGA TAATGAATAT GATGTTATAC CTGTTGTTGG AGGAGAACTG
GGGCTTGAAA TTTCCCAGCT TTATGGATTA ATGAATCTGG AACTAGTTCT GGGGTTTGGC
CATGACCTGG AATACGAATC CAGCAATTTA TATATAAGAA TTGGAAAATA TTTTTAA
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| Protein sequence | MDLGYRKCLF FLVILLIMVT SPVLAGKWYT MKTDHFIINF QKDNAMAAYK VSRIAEDVHD
KLIRFMEYEP VTKTYINIFD DADMANGSAD VICFNRINVY LRKPDIYSGM VGYSESWLRL
VITHEYTHIL HLDMNEGASR FYRHILGKIP ILTTPNILQP WWLIEGYTTY TETKFTNGGR
GKGDIYSMYI RTAALQDKLY SVDKVSGKYD LSSWPTGGIP VYIYGLSICR YIAKEYGEDK
LVEISHKFCE EPQEGINKVI EKVLGIEVDE LYKSWKFEQK RKAIELNERI ETEGRTEITR
LTEHGYFTLN PSVSPDGKKV AYYHYYNKFS AIRILTEDGR DYQLVPAISS SDGNITWSPD
GKKLVYAKQD VYKKVYNYYD LYMYDFTTDR EIRLTRGERA YAPVFKDNNT IIYLTQDKGI
TSIKKIDLKT RQTSTILKGN SSFSFSSLDI SPDGNKAVLS VMYNSKKDLY LYSFEDKVLK
PLIDDNHIEV FPVWSPDGKY VVFSSDRNGR FNLYALDMVT KNLYRITNLF TGAFKPSFRN
KDEIVFVGYS LDGYDLYSVR LDRVEWKRVG KLNFVNRRRI IKIKEEEDSP DYWFEKLKTS
YRVREYSPFP SLYPKYIMPN FSLIYTSEGT SLDTGFTTYG KDALEKHSYS MSFNYHNKSP
EPSFDFQYSY QPGTFLLSLT TNQSLIKDGD WVRERNVDIM LGYPLINKSF YYHLLLLNSV
YHDEYCYDNK DVDSYTLYGT GWRYGGITGS GPVQNSLYWG IDSYWKKDNI EEYKVEMSAD
NYLELNKKTT LAGRLIIGYN KIDDFSLGQG NLVRAFREEP LKGSKLAIFN LELRKELINI
ESGPGVYPVF YDDLNGTLFY DFGLTGDNEY DVIPVVGGEL GLEISQLYGL MNLELVLGFG
HDLEYESSNL YIRIGKYF
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