13 homologs were found in PanDaTox collection
for query gene Tgr7_3266 on replicon NC_011901
Organism: Thioalkalivibrio sp. HL-EbGR7



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011901  Tgr7_3266  MshA pilin protein MshD  100 
 
 		 144 aa  289  1e-77  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.225812  n/a   
 
 
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NC_007498  Pcar_0393  MshA pilin protein MshD  45.39 
 
 		 149 aa  112  2.0000000000000002e-24  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000144635  n/a   
 
 
-
 
NC_007908  Rfer_3340  hypothetical protein  40.54 
 
 		 163 aa  86.7  9e-17  Rhodoferax ferrireducens T118  Bacteria  normal  0.707933  n/a   
 
 
-
 
NC_008740  Maqu_0762  hypothetical protein  31.9 
 
 		 168 aa  73.6  0.0000000000009  Marinobacter aquaeolei VT8  Bacteria  normal  0.036858  n/a   
 
 
-
 
NC_007404  Tbd_0756  hypothetical protein  32.39 
 
 		 180 aa  65.9  0.0000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_3103  hypothetical protein  38.46 
 
 		 157 aa  65.1  0.0000000003  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_011138  MADE_00260  putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshD (pilus type IV)  28.57 
 
 		 202 aa  49.7  0.00001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_4567  MSHA pilin protein MshD  38.46 
 
 		 195 aa  48.9  0.00002  Colwellia psychrerythraea 34H  Bacteria  normal  0.490288  n/a   
 
 
-
 
NC_008228  Patl_0179  prepilin-type cleavage/methylation-like  39.34 
 
 		 189 aa  48.1  0.00003  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_1143  hypothetical protein  31.34 
 
 		 156 aa  45.4  0.0003  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008340  Mlg_2389  general secretion pathway protein I  27.78 
 
 		 149 aa  42.4  0.002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  hitchhiker  0.000000242378 
 
 
-
 
NC_009783  VIBHAR_03689  hypothetical protein  35.71 
 
 		 191 aa  42.7  0.002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009714  CHAB381_0552  prepilin-type N- terminal cleavage/methylation domain-containing protein  24.51 
 
 		 203 aa  40.8  0.007  Campylobacter hominis ATCC BAA-381  Bacteria  normal  0.296656  n/a   
 
 
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