| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3266 |
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| Symbol | |
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| ID | 7315494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3419014 |
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| End bp | 3419448 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643618167 |
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| Product | MshA pilin protein MshD |
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| Protein accession | YP_002515321 |
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| Protein GI | 220936422 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.225812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCCACTTC AAAGGGGCTT CACCCTCATC GAACTGATCA TCGCCATCGT CGTCATCGGC
GCGGCGGTGG GCGGTGTGAT GCTGCTGGTG GCCAACGTGG CTGCGCGCAG CGTGGACCCC
ATGATCCAGA CCCAGGCGGT CTACATCGCG CAATCCTATC TGGAAGAGGC CCTGCTGCGG
CCCTATGACG GACCGGCAGA CTGCGCCGGC CCGCGAGACC AGTGGCTGGG CGTTGCGGCC
TACGATTGCA TCAACGCACA AACACCCACG GACCAGCAGG GGAATGGTCT GCCCGGGTTG
TCAGCCTATC GCGTCACGGT CAATGTGTCT GATACGAGTC TCGGTGGCGT CGCGGCCCGG
CGAGTGGAGG TGCAGGTCAG CCACACGAGC CAGCCCATCA ATCTCTCACT GGCCGGCTAC
AGGGCGCAGT ACTGA
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| Protein sequence | MPLQRGFTLI ELIIAIVVIG AAVGGVMLLV ANVAARSVDP MIQTQAVYIA QSYLEEALLR
PYDGPADCAG PRDQWLGVAA YDCINAQTPT DQQGNGLPGL SAYRVTVNVS DTSLGGVAAR
RVEVQVSHTS QPINLSLAGY RAQY
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