9 homologs were found in PanDaTox collection
for query gene TK90_2843 on replicon NC_013930
Organism: Thioalkalivibrio sp. K90mix



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013930  TK90_2843  hypothetical protein  100 
 
 
474 aa  956    Thioalkalivibrio sp. K90mix  Bacteria  hitchhiker  0.00000192028  normal  0.281035 
 
 
-
 
NC_009831  Ssed_1651  hypothetical protein  43.55 
 
 
945 aa  48.1  0.0003  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.000121455  normal 
 
 
-
 
NC_011138  MADE_01203  AAA ATPase containing von Willebrand factor type A (vWA)  40.68 
 
 
1359 aa  47.8  0.0004  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1730  Tfp pilus assembly protein FimV-like protein  34.78 
 
 
731 aa  47.8  0.0005  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0317233  hitchhiker  0.00941699 
 
 
-
 
NC_011761  AFE_2072  hypothetical protein  34.78 
 
 
722 aa  47.8  0.0005  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.813162  n/a   
 
 
-
 
NC_008789  Hhal_1807  putative membrane protein; K07288 uncharacterized membrane protein  38.1 
 
 
822 aa  45.8  0.002  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp1263  FimV protein  36.23 
 
 
897 aa  43.5  0.007  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_2985  hypothetical protein  40.32 
 
 
1135 aa  43.9  0.007  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.00018881  normal  0.421866 
 
 
-
 
NC_002977  MCA2061  hypothetical protein  29.92 
 
 
819 aa  43.5  0.009  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>