| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2985 |
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| Symbol | |
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| ID | 6117300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3655505 |
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| End bp | 3658912 |
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| Gene Length | 3408 bp |
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| Protein Length | 1135 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634527 |
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| Product | hypothetical protein |
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| Protein accession | YP_001761351 |
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| Protein GI | 170727325 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | [TIGR03504] FimV C-terminal domain
[TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00018881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.421866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTTC GCACTCCGTA TCTAGTCGGT TTGATTGCCT CAATATTACT CGTCCTAGTT
ACCAGCTCCA TTGAACAGAC TGTATCTGCA GCTGAACCTT TAAAGATTAC GGGTCCAGAT
GGTGAGGTTA GAGAAACCAC TAGGCAATAT GGTCCTACTC GCTCTTCTGA CACATTTTGG
AGTATAGCTC AGAAGATGCA GCCTGATGCT AGTGTTAGCA TTTATCAGGT GATGGGGGCT
ATTTATGATG CCAATCCACA CGCCTTTACC AACTCAAATT ACAACAGTTT AGAGAAAGGG
ATGATACTGC TTATCCCCTC AAAAGAGGTG ATGTTAGCGA TTCCTAAGAG CATGGCCAAG
CAGCGTGCGG AGCGAAATGA TGCTGGTTGG AAAAAGATCA CCGCCAAACC TGTTGCAGCT
CAAAAGCCGA GCACTCCTGT CGCTGAGCCA ATAAAAACTG AACAGCCAGA GTCGGCTTCT
GTTAAAGAGC CTGTAAGCGA GAGCCCAAAA AGCGTCAATG ACGCTGTGCA AAACAGTGAT
CTGCAAGCCA AGTTAGATGC ATCCGAAGAT AAAAACCTGC AATTGGCAGA TGAACTAGTG
AGAGCTCAGG ATGAGCTCAG TCTTAGTAGC AGTGATATCG AAGCCTTGAC TGGGAAAGTG
GATCTTCTCA ATGAAGAGGT TGCTGTTTTA CAGGAGCAAC TTCAAGCAAG CCGATTAAAA
AATGAATCTT TGACTGCAGA TGTTGAAGCA CTGAAAGAGA GGTTGGCTGA GATGGAGCTA
CCAGCTCCTC AAGAGGATGA GATTAAGTGG AAAGAGCTGA TGAGCAATCC CGTAGCTCTT
ATTCTTGGTG CTGCGCTTCC TGCATTTATC TTCCTAATTT TACTTTGGTT ATTCTTAAAG
CGTCGTCGAA ATGAAGGTGA GCAGCAGGAG AGTGAAGAGA AGAGTGTAGA AGGTGAGGCT
GAATCGGCTC CGGCACCAAG CGCAGAAGAG GCTGTGAGTG AGAGTGAAAC TTCTGATGAT
ATGGCTGTCC ATCTTGATAC CGAGGAGGAT GAAGACTCTC TTGACTCCTT AATGAATGTC
GATTCTAGCG AGTTGCAACC AGAAGTTGAG ATGGAAGTTG ACTCAGAACA GATGGATATG
GCGAATGAGA TGTTTGTTGA TCCAGGTGAG ACTGAAACTG AAGGGGAGAG CGACCTTGAT
GTGGAAGATG AAGGCCAGTC TCTTGATGAG CTTTGGGCTG AAGCTATGGG AGAACAAGAT
GGTGAAGGGG AAGAGGATTT AGACTCGCTT CTTGAAGACT TCGGAGTCGA TGAGAAAGAG
GAGACGCCTG ATGCTGCCGA AGCTGATCTG GATTCATTGC TTACCGATAT CAATGAAACA
GAAACAGCCT CAGAGCCTGA ATCGGCTGAA CAGGAAGAGG ACTTAGATGC CCTGCTTGAG
GGGATAGGTG AAACGGAAGC TGAGCCTGAA GTTAAGAGTG AAGAAGCCGA TCTTGACTCA
CTTCTTGAAG AGTTTGATCT ACCCGCTGAG GAGAGCCAAG GTGAAGAAAG TGGTGAAGAT
CTTAATGAGG CGATAGCTGC AGAGCTAGCG GCAGAGGCCG ATAATGAGCA GGTTGATGAA
GCTGATCTGG ACTCCTTATT AGCAGGATTT GATGAACCCC AAGGCGATGA AACACCTGAA
GAAGCTGAGC TGAGTGAAGA GATAGCAGCC CAATTGGCTG CAGATACAGA AGATGAGCCA
GTTGATGAAG CCGATCTTGA TTCACTGCTT GCAGGCTTTG ATGAGCCCGA AAATGCTGAG
AATAGTGAAA GTGCTGAAGC AACTGAAGCG CCTGAATTAA CCGAAGAAGC TGATTTAAGC
GCAGAGATTG CTGCCGAGCT AACCGAATCT GTTGATGAGC AGGCCGATGA AGCCGATCTT
GATTCACTGC TTGCAGGCTT TGATGAGCCC GAAAATGCTG AGAATAGTGA AAGTGCTGAA
GCAACTGAAG CTCCCGAACT AACAGAGGAA GCAGACCTAA GCGCAGAGAT TGCCGCTGAG
TTAACTGAAT CTGTTGATGA GCAGGCCGAT GAAGCCGATC TGGACTCACT GCTTGCAGGT
TTTGATGAGC CGGAAAATGC CGAGAATAGT GAAAGTGCTG AAGCAACTGA AGCGCCTGAA
TTAACCGAAG AAGCTGATTT AAGTGCAGAG ATTGCTGCCG AGCTAACCGA ATCTGTTGAT
GAGCAGGCCG TTGATGCGGA TCTGGACTCA CTGCTTGCAG GCTTTTATGA GCCTGAAAAT
GCCGAGAATA GTGAAAGTGT TGAAGCGCCT GAATTAACCG AAGAAGCTGA TTTAAGCGCA
GAGATTGCTG CCGAGCTAAC CGAATCTGTT GATGAGCAGG CCGATGATGC GGATCTGGAC
TCACTGCTGG CAGGCTTTGA TGAGCCTGAA AATGCCGAGA ATAGTGAAAG TGTTGAAACG
CCTGAACTAA CCGAAGAAGC TGATTTAGGT GAAGAGATTG CTGCCGAGCT AACCGAATCA
GTTGATGAGC CGAAGAGCAC TGAAAACCTT GAGAGTACAG AAAGCGTAGA GGCAACAGAA
CTGCCTGAGT TAGCCGAAGA AGCCGATTTA GGTGAGGAGT TGGCTGCTCA AAAGAGTGAA
GTTGAAGCTG AAGATACCAT AGATGATGCT GACCTGGACT CTCTACTCGA TGGTTTCGAT
GAGCCTGCTG AGCCACTGCA GAGTGAAGAT GTGCAGGTAG AGGAGCAAGT TGAGCCTCAA
AAGGATGAAG CCCTTGATGC ACTATTGGCG GATCTAAAAT CAGTAGAGGA GAAGCCCGCT
TCTAAAGAGG ATAACTTCTT TGGTGACCTA AAGAGCAATA AGTCTAAAAG TGATAATAGC
CTTGAGTGGG ATGGTGCATT AACCGATGAT GCTAACGAAT CACAGCCTGC TGAGGGTGGG
GAGCATCCAG ATGTTATTGA AGAGCAAAGT GATGACGACT TTGATCTCTC ACTTGCTGAC
GAAGGAAAAA TAACCGTTGA TGAAGCTTTA GCGGCGTTAG ATGCTCAGGA GCAGTCTGAA
TCATCGGCGA GTCATGTTGA TGAACATGAT CTGACCACAT TTCAAAAAGA TAACGGTTTC
ATCGACATTG ATCGATTGTT AAATGAAGCT GACGAAGAGA GTGATGAGGT TGATCAATAT
AAAGAGCTCG ATGTCGATAT GGGAGAGCTT GATAGCTTAA TGGGTAATGC TTCTATGGTA
GATGTTGATG ATGAGGAGAA CTCAGTTAAC GCCAAATTAG ATCTTGCTAG AGCTTATATC
GAGATTGACG ATAATGACAG TGCCATGGCC TTGCTTAAAG AGGTGCAGTT AGATGGTAAT
GAGAGGCAAC AAGAGGAAGC TCAAGGCTTA ATCAAAACCC TCGGCTAA
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| Protein sequence | MNFRTPYLVG LIASILLVLV TSSIEQTVSA AEPLKITGPD GEVRETTRQY GPTRSSDTFW
SIAQKMQPDA SVSIYQVMGA IYDANPHAFT NSNYNSLEKG MILLIPSKEV MLAIPKSMAK
QRAERNDAGW KKITAKPVAA QKPSTPVAEP IKTEQPESAS VKEPVSESPK SVNDAVQNSD
LQAKLDASED KNLQLADELV RAQDELSLSS SDIEALTGKV DLLNEEVAVL QEQLQASRLK
NESLTADVEA LKERLAEMEL PAPQEDEIKW KELMSNPVAL ILGAALPAFI FLILLWLFLK
RRRNEGEQQE SEEKSVEGEA ESAPAPSAEE AVSESETSDD MAVHLDTEED EDSLDSLMNV
DSSELQPEVE MEVDSEQMDM ANEMFVDPGE TETEGESDLD VEDEGQSLDE LWAEAMGEQD
GEGEEDLDSL LEDFGVDEKE ETPDAAEADL DSLLTDINET ETASEPESAE QEEDLDALLE
GIGETEAEPE VKSEEADLDS LLEEFDLPAE ESQGEESGED LNEAIAAELA AEADNEQVDE
ADLDSLLAGF DEPQGDETPE EAELSEEIAA QLAADTEDEP VDEADLDSLL AGFDEPENAE
NSESAEATEA PELTEEADLS AEIAAELTES VDEQADEADL DSLLAGFDEP ENAENSESAE
ATEAPELTEE ADLSAEIAAE LTESVDEQAD EADLDSLLAG FDEPENAENS ESAEATEAPE
LTEEADLSAE IAAELTESVD EQAVDADLDS LLAGFYEPEN AENSESVEAP ELTEEADLSA
EIAAELTESV DEQADDADLD SLLAGFDEPE NAENSESVET PELTEEADLG EEIAAELTES
VDEPKSTENL ESTESVEATE LPELAEEADL GEELAAQKSE VEAEDTIDDA DLDSLLDGFD
EPAEPLQSED VQVEEQVEPQ KDEALDALLA DLKSVEEKPA SKEDNFFGDL KSNKSKSDNS
LEWDGALTDD ANESQPAEGG EHPDVIEEQS DDDFDLSLAD EGKITVDEAL AALDAQEQSE
SSASHVDEHD LTTFQKDNGF IDIDRLLNEA DEESDEVDQY KELDVDMGEL DSLMGNASMV
DVDDEENSVN AKLDLARAYI EIDDNDSAMA LLKEVQLDGN ERQQEEAQGL IKTLG
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