8 homologs were found in PanDaTox collection
for query gene Swoo_3957 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010506  Swoo_3957  hypothetical protein  100 
 
 
326 aa  669    Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2143  hydrolase/lipase  45.45 
 
 
336 aa  267  2e-70  Dechloromonas aromatica RCB  Bacteria  normal  hitchhiker  0.00149728 
 
 
-
 
NC_011312  VSAL_I1595  putative lipoprotein  43.86 
 
 
336 aa  250  2e-65  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.146159  n/a   
 
 
-
 
NC_009524  PsycPRwf_1726  hypothetical protein  30.06 
 
 
249 aa  45.1  0.001  Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.0000120818  normal 
 
 
-
 
NC_014158  Tpau_2983  PGAP1 family protein  32 
 
 
437 aa  45.4  0.001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1690  hypothetical protein  25.45 
 
 
220 aa  44.7  0.002  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.00126399  n/a   
 
 
-
 
NC_013510  Tcur_1275  acetyltransferase and hydrolase with the alpha/beta hydrolase fold-like protein  27.03 
 
 
448 aa  42.7  0.008  Thermomonospora curvata DSM 43183  Bacteria  normal  0.676872  n/a   
 
 
-
 
NC_009901  Spea_3739  PGAP1 family protein  25.62 
 
 
415 aa  42.4  0.01  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
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