Gene Swoo_3957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3957 
Symbol 
ID6118306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4822495 
End bp4823475 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content44% 
IMG OID641635518 
Producthypothetical protein 
Protein accessionYP_001762309 
Protein GI170728283 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGT TATTGAAAGT CCACATGTTA ATTGCTATCT ACCTCTTGGT AGGAGCCTGT 
GCGCCCAACA AAACAAAGTT CAGTGATTTA CCATTAAGTA ATATCAACAG ATTGCCCAAT
CCAGATGTCA CCACGCGTAT TTCCTCACTA AGTAATTGCA CCTCTAAGGA CAGTGACCAA
CTAAACCTGA ACTCTCAAGA ACCTGTAACA GTGATAGTCC ATGGCTGTTT TGCTTCAGCC
GGCATGTTTC GCAAGCTGGC TGATGTGTAT GCCTTTCATG GTCAGCAGAC AGTTTGTTTC
AACTATGATG ATCGTGAACG ACTAACAAGT GGCGCTGCTG CACTGGCGAA GGCACTTAAA
GAGCTCTCCT CAGTGCTTCA GCAACCTAAA ATCGTGGTGA TTGGCCACAG TCAAGGCGGA
CTGATTGCTC GCCGAGCATT GATAGATGAG CCCTCAGATA GTACAGCTGT TGGGGATATT
GAGATAGATC TAGTGACGAT ATCAACCCCC TTTGGTGGTA TTGAAGCTGC CGACCATTGT
GGCTCAACAA CCTTGGCATG GTTATCTTTA GGGCTCACTA AGCCCATTTG TCAGTTGATC
ACTGGCAGAA AATATCGAGA CATTACAGCC AATTCAGATT TTATATCAAG ACCTGGAAAC
CTGCAGTCCT CGGTCAATAG ACATTTTAAG ATAATCACAG ACGAAGCGAA CACCTGTCGT
GTCCACAATA ATCAAGGCAC ATGTATTGAA GATGATTTTG TCTTTAGTCT CGATGAACAA
AATCAGAGAG TTGTAGACTC ACAAGCGGTT ACTACATCGC AGGTGGTTAA AGCAGGTCAT
GTGGAGATTG TAGGTGACTT AGAAACAGTA CCAATTAAGC TTATAGGGCT TTTGCAACAA
CAAGGGCTGT TAAGGAGTAC CCCACCGCAA TCCCAAGGTG AATTAACTAG GCTACTCGAG
GATATATATA TCTCCCCTTA G
 
Protein sequence
MNLLLKVHML IAIYLLVGAC APNKTKFSDL PLSNINRLPN PDVTTRISSL SNCTSKDSDQ 
LNLNSQEPVT VIVHGCFASA GMFRKLADVY AFHGQQTVCF NYDDRERLTS GAAALAKALK
ELSSVLQQPK IVVIGHSQGG LIARRALIDE PSDSTAVGDI EIDLVTISTP FGGIEAADHC
GSTTLAWLSL GLTKPICQLI TGRKYRDITA NSDFISRPGN LQSSVNRHFK IITDEANTCR
VHNNQGTCIE DDFVFSLDEQ NQRVVDSQAV TTSQVVKAGH VEIVGDLETV PIKLIGLLQQ
QGLLRSTPPQ SQGELTRLLE DIYISP