21 homologs were found in PanDaTox collection
for query gene Swit_1544 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009511  Swit_1544  ethyl tert-butyl ether degradation EthD  100 
 
 		 101 aa  207  4e-53  Sphingomonas wittichii RW1  Bacteria  normal  1  hitchhiker  0.00113228 
 
 
-
 
NC_013739  Cwoe_5181  Ethyl tert-butyl ether degradation EthD  55.21 
 
 		 101 aa  91.3  4e-18  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
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NC_007778  RPB_4508  ethyl tert-butyl ether degradation EthD  42.86 
 
 		 99 aa  76.3  0.0000000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.491741  normal  0.208752 
 
 
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NC_013205  Aaci_0812  Ethyl tert-butyl ether degradation EthD  37.5 
 
 		 102 aa  63.9  0.0000000007  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
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NC_009485  BBta_5960  hypothetical protein  40.91 
 
 		 102 aa  62  0.000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.546785 
 
 
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NC_009429  Rsph17025_3811  hypothetical protein  38.64 
 
 		 123 aa  61.6  0.000000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  hitchhiker  0.00812123  normal  1 
 
 
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NC_007494  RSP_3830  hypothetical protein  40.91 
 
 		 104 aa  58.9  0.00000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.070961  n/a   
 
 
-
 
NC_009050  Rsph17029_3523  ethyl tert-butyl ether degradation EthD  40.91 
 
 		 104 aa  58.9  0.00000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010623  Bphy_5384  ethyl tert-butyl ether degradation EthD  34.34 
 
 		 102 aa  58.5  0.00000003  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.506576 
 
 
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NC_013411  GYMC61_2865  Ethyl tert-butyl ether degradation EthD  32.95 
 
 		 103 aa  55.8  0.0000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013757  Gobs_1838  Ethyl tert-butyl ether degradation EthD  38.14 
 
 		 103 aa  53.9  0.0000007  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.293047  n/a   
 
 
-
 
NC_013757  Gobs_1142  Ethyl tert-butyl ether degradation EthD  35.71 
 
 		 106 aa  52  0.000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.928351  n/a   
 
 
-
 
NC_008781  Pnap_0992  ethyl tert-butyl ether degradation EthD  36.84 
 
 		 102 aa  50.1  0.00001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_7024  Ethyl tert-butyl ether degradation EthD  30.23 
 
 		 135 aa  47.4  0.00006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.211246  normal  0.279453 
 
 
-
 
NC_008825  Mpe_A0370  hypothetical protein  31.71 
 
 		 113 aa  47  0.00008  Methylibium petroleiphilum PM1  Bacteria  normal  0.978921  normal  1 
 
 
-
 
NC_013743  Htur_2876  Ethyl tert-butyl ether degradation EthD  38.89 
 
 		 107 aa  47  0.00009  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013441  Gbro_0234  Ethyl tert-butyl ether degradation EthD  38.2 
 
 		 103 aa  44.3  0.0005  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_010338  Caul_3594  ethyl tert-butyl ether degradation EthD  29.9 
 
 		 103 aa  41.6  0.004  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007951  Bxe_A3617  hypothetical protein  33.33 
 
 		 228 aa  41.2  0.005  Burkholderia xenovorans LB400  Bacteria  normal  0.706123  normal  1 
 
 
-
 
NC_012792  Vapar_5978  Ethyl tert-butyl ether degradation EthD  29.59 
 
 		 104 aa  40.4  0.008  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008043  TM1040_3503  ethyl tert-butyl ether degradation EthD  32.32 
 
 		 104 aa  40  0.01  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.358268 
 
 
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