Gene RPB_4508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4508 
Symbol 
ID3912324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5094766 
End bp5095065 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content66% 
IMG OID637886411 
Productethyl tert-butyl ether degradation EthD 
Protein accessionYP_488102 
Protein GI86751606 
COG category 
COG ID 
TIGRFAM ID[TIGR02118] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.491741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.208752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTGCC TCACCGTACT GTATCCGCCG CCGGACGATC CGGCCCGCTT CAAGGATTAC 
TACGTCAAGA TTCACGTGCC GCTGGCGAAG CAATTGCCCG GGCTGGGATC CTGCGCCTAC
GGCTTCCCGG CGCCGCTCGG GCCCGGCGAT GCGCCGTTCT GTGTGTTCAC CGCGTTGTTC
GATAGCGCCG AGGCGATGGG GCAGGCGCTG CAATCGGAGA TCGGCGCCAA GGTCGCCGCC
GACGTGCCGA ACTACTCGCC GAAGGGTGCG CAGCTGATGC ACTATGCGGT GGAGGGCTGA
 
Protein sequence
MHCLTVLYPP PDDPARFKDY YVKIHVPLAK QLPGLGSCAY GFPAPLGPGD APFCVFTALF 
DSAEAMGQAL QSEIGAKVAA DVPNYSPKGA QLMHYAVEG