17 homologs were found in PanDaTox collection
for query gene RPB_4508 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007778  RPB_4508  ethyl tert-butyl ether degradation EthD  100 
 
 		 99 aa  201  3e-51  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.491741  normal  0.208752 
 
 
-
 
NC_013757  Gobs_1838  Ethyl tert-butyl ether degradation EthD  44.33 
 
 		 103 aa  80.9  0.000000000000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.293047  n/a   
 
 
-
 
NC_013739  Cwoe_5181  Ethyl tert-butyl ether degradation EthD  46.46 
 
 		 101 aa  76.6  0.0000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_1544  ethyl tert-butyl ether degradation EthD  42.86 
 
 		 101 aa  76.3  0.0000000000001  Sphingomonas wittichii RW1  Bacteria  normal  1  hitchhiker  0.00113228 
 
 
-
 
NC_013757  Gobs_1142  Ethyl tert-butyl ether degradation EthD  42.42 
 
 		 106 aa  75.9  0.0000000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.928351  n/a   
 
 
-
 
NC_010623  Bphy_5384  ethyl tert-butyl ether degradation EthD  33.66 
 
 		 102 aa  55.5  0.0000003  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.506576 
 
 
-
 
NC_009485  BBta_5960  hypothetical protein  35.96 
 
 		 102 aa  53.1  0.000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.546785 
 
 
-
 
NC_013441  Gbro_0234  Ethyl tert-butyl ether degradation EthD  40.4 
 
 		 103 aa  51.2  0.000005  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_0992  ethyl tert-butyl ether degradation EthD  36.84 
 
 		 102 aa  47.8  0.00004  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_3795  Ethyl tert-butyl ether degradation EthD  51.43 
 
 		 104 aa  47.4  0.00007  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_2865  Ethyl tert-butyl ether degradation EthD  27.27 
 
 		 103 aa  44.7  0.0004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007494  RSP_3830  hypothetical protein  31.58 
 
 		 104 aa  42.4  0.002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.070961  n/a   
 
 
-
 
NC_013205  Aaci_0812  Ethyl tert-butyl ether degradation EthD  27.37 
 
 		 102 aa  42.4  0.002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_009050  Rsph17029_3523  ethyl tert-butyl ether degradation EthD  31.58 
 
 		 104 aa  42.4  0.002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007498  Pcar_0984  hypothetical protein  40.43 
 
 		 106 aa  42.7  0.002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_7024  Ethyl tert-butyl ether degradation EthD  34.62 
 
 		 135 aa  41.6  0.004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.211246  normal  0.279453 
 
 
-
 
NC_009429  Rsph17025_3811  hypothetical protein  29.79 
 
 		 123 aa  40.8  0.006  Rhodobacter sphaeroides ATCC 17025  Bacteria  hitchhiker  0.00812123  normal  1 
 
 
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