Gene BBta_5960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5960 
Symbol 
ID5153730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6172004 
End bp6172312 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content59% 
IMG OID640560683 
Producthypothetical protein 
Protein accessionYP_001241805 
Protein GI148257220 
COG category 
COG ID 
TIGRFAM ID[TIGR02118] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.546785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGG TTCTCGTGCT CTACAAGACC CCGAAGAGCG CCGAAGCATT CGACAAGCAC 
TACATGAATG TCCACGTACC GCTGGCGAAA AAGATCCCTG GCCTCAAGAC CTACGACATC
AGCCGCGGCC CGGTGAATGG ACCGGCGGGA GCCACCAACA TTCACCTCGT GGCGACGCTG
ACATTCGATT CGATGCAGGC GTTGCAGGCG GGCATGGGCT CCGCCGAGGG AAAGGCTGCC
GCGGGAGATC TGCCTAATTT TGCTGATGGC GGCGTCGACC TTTACATCTT CGACACCCAA
GACGTTTAG
 
Protein sequence
MPKVLVLYKT PKSAEAFDKH YMNVHVPLAK KIPGLKTYDI SRGPVNGPAG ATNIHLVATL 
TFDSMQALQA GMGSAEGKAA AGDLPNFADG GVDLYIFDTQ DV