21 homologs were found in PanDaTox collection
for query gene Gbro_0234 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013441  Gbro_0234  Ethyl tert-butyl ether degradation EthD  100 
 
 		 103 aa  211  2.9999999999999995e-54  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_1142  Ethyl tert-butyl ether degradation EthD  55.91 
 
 		 106 aa  108  2.0000000000000002e-23  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.928351  n/a   
 
 
-
 
NC_012669  Bcav_3795  Ethyl tert-butyl ether degradation EthD  53.54 
 
 		 104 aa  95.5  2e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013757  Gobs_1838  Ethyl tert-butyl ether degradation EthD  52.69 
 
 		 103 aa  94  6e-19  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.293047  n/a   
 
 
-
 
NC_009050  Rsph17029_3523  ethyl tert-butyl ether degradation EthD  45.05 
 
 		 104 aa  71.6  0.000000000004  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007494  RSP_3830  hypothetical protein  45.05 
 
 		 104 aa  71.6  0.000000000004  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.070961  n/a   
 
 
-
 
NC_009485  BBta_5960  hypothetical protein  40.21 
 
 		 102 aa  69.7  0.00000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.546785 
 
 
-
 
NC_013205  Aaci_0812  Ethyl tert-butyl ether degradation EthD  39.58 
 
 		 102 aa  68.9  0.00000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_009429  Rsph17025_3811  hypothetical protein  41.76 
 
 		 123 aa  68.6  0.00000000003  Rhodobacter sphaeroides ATCC 17025  Bacteria  hitchhiker  0.00812123  normal  1 
 
 
-
 
NC_013093  Amir_0609  Ethyl tert-butyl ether degradation EthD  34.91 
 
 		 116 aa  66.2  0.0000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_007778  RPB_4508  ethyl tert-butyl ether degradation EthD  40.4 
 
 		 99 aa  64.7  0.0000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.491741  normal  0.208752 
 
 
-
 
NC_008781  Pnap_0992  ethyl tert-butyl ether degradation EthD  44.79 
 
 		 102 aa  63.2  0.000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_2865  Ethyl tert-butyl ether degradation EthD  33.01 
 
 		 103 aa  63.2  0.000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_5181  Ethyl tert-butyl ether degradation EthD  41.67 
 
 		 101 aa  61.2  0.000000004  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_1544  ethyl tert-butyl ether degradation EthD  39.81 
 
 		 101 aa  61.2  0.000000004  Sphingomonas wittichii RW1  Bacteria  normal  1  hitchhiker  0.00113228 
 
 
-
 
NC_010623  Bphy_5384  ethyl tert-butyl ether degradation EthD  37.5 
 
 		 102 aa  58.9  0.00000002  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.506576 
 
 
-
 
NC_013159  Svir_17970  hypothetical protein  29.91 
 
 		 110 aa  48.9  0.00002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.309891  normal  1 
 
 
-
 
NC_013131  Caci_7024  Ethyl tert-butyl ether degradation EthD  30.59 
 
 		 135 aa  47.8  0.00006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.211246  normal  0.279453 
 
 
-
 
NC_013131  Caci_4276  Ethyl tert-butyl ether degradation EthD  42.22 
 
 		 106 aa  42  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.264432 
 
 
-
 
NC_008043  TM1040_3503  ethyl tert-butyl ether degradation EthD  35.63 
 
 		 104 aa  41.2  0.005  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.358268 
 
 
-
 
NC_010338  Caul_3594  ethyl tert-butyl ether degradation EthD  32.22 
 
 		 103 aa  40.8  0.006  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>