10 homologs were found in PanDaTox collection
for query gene Swit_1503 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008048  Sala_1109  autotransporter beta-domain-containing protein  55.95 
 
 		 1071 aa  1087    Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_1503  autotransporter beta-domain-containing protein  100 
 
 		 1069 aa  2083    Sphingomonas wittichii RW1  Bacteria  normal  0.662364  normal  1 
 
 
-
 
NC_007794  Saro_0545  Outer membrane autotransporter barrel protein  34.27 
 
 		 1058 aa  518  1.0000000000000001e-145  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_010338  Caul_4552  autotransporter beta-domain-containing protein  35.62 
 
 		 1097 aa  444  1e-123  Caulobacter sp. K31  Bacteria  normal  1  normal  0.518565 
 
 
-
 
NC_008347  Mmar10_1329  outer membrane autotransporter  30.18 
 
 		 1058 aa  284  5.000000000000001e-75  Maricaulis maris MCS10  Bacteria  normal  0.0892684  normal  0.563685 
 
 
-
 
NC_007005  Psyr_0620  Outer membrane autotransporter barrel  24.06 
 
 		 759 aa  70.5  0.0000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.553237 
 
 
-
 
NC_004578  PSPTO_0714  autotransporter, putative  22.97 
 
 		 763 aa  62.4  0.00000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007614  Nmul_A1566  Outer membrane autotransporter barrel  24.49 
 
 		 1119 aa  51.6  0.00007  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_2683  Outer membrane autotransporter barrel  24.44 
 
 		 983 aa  47.8  0.001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.525643  hitchhiker  0.000404465 
 
 
-
 
NC_010717  PXO_00711  YapH protein  26.57 
 
 		 2711 aa  45.1  0.008  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0184521  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>