| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0714 |
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| Symbol | |
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| ID | 1182334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 765763 |
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| End bp | 768054 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637392089 |
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| Product | autotransporter, putative |
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| Protein accession | NP_790561 |
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| Protein GI | 28867942 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGCTG TGATTTTTCG CAAGACCCTT CTCGCCATGG CTGTGGCTGC AACTGCTATC
CCTGCTTTTG CTGAAACTGT CCAACTGACC AATGCTGGCT ACAACAGCGA GCGTCAGGCC
CATACTGGCA ATCTTGAAAT CAACGGCGCC TATACCGGCA GTACGGTTAA AGACGCGATC
AAACTCAGCG GTTCGACGGT TGACAAGGAT CTGATCTTCA ACGCGAACAT CAACAACTCC
GGCAACCTTG CCGGTGGTGA AGAAGCCAAA GGCGTCAGTC TCCAAGGCGG CAGAATTGTC
GGCAGCGTTA TCAACCGGCG CCTGATTGAT GTGACGAGCA CAGGGGCAAC TGCTCTGGAT
GTCGCGACGA GTCTGGCTGT TTTCGAAAAC CATGGCAGCA TTACCGCCAC GGGCACGGGG
TCTAAAGGCC TTCGCATCGA CGGTGCCACG ATCACGGGCT CCAATGCTTA TATAACCAAT
GCGGGGACGA TTCGTGGGGA TGGCGCTGCT ATTGCGATCG GTACTACCCG ATACAGCATT
AGCAATGCCC AACCCTGGTT TATCGAGCGG GGCGACTTCA ACATCTACAA CACCGGCTCG
ATCATTTCTG CAGACAGGGC CGTCGACGCT TCAAAAAGCA ACCGACCGGT CGAGCTGATC
CTGAGAAAAG GCAGCGTTGT GGTCGGCAAC CTGATAGACC TGAGCAATAT CGAGCTGGAA
GGGGATACCT CTTTCGCAGG TACTGACAGC CATACCGATG GCTACAATAT TCGTCTCAAG
ACGGGCGGCG AGGTTTACGT TGGCGGCACC TCCAGCAGCC CCACTACCAT GACCTTTGAG
TCCACGCACA CCAGCATTAA CGGCGACCTC TATGTCGACG GCAACTCTGC GCTCGGCCTG
AATCTGAGCA ATGCCACTGA TACTAAAACT GCTGTGCTGA AAGTGACCGG CACTACTCAG
TTCGAGCAGG GCGCGCAAGT AAAGCTGGCG GCAAAGGGTG ACGACTTCAA CGCCAACGGC
ACGACTTACA AGCTTATCGA GGCAGGTAAG ATCGAATTGC TGGGCAAAGA TGGCACAGCG
GTCGATTCTG CCGGCAAGCT CGATGTGGTC AGTACCTCCG CGCTACTTAA AATCGACAGC
TATACCGTCG ATGGCAAAAA CGTGGTGGCT GTAGTCACCG GTAAAGGCCG GGAAGAGGTC
GCCCAGGTAG TTGCTGATAA CGGCGGCTCA GTTAATGAAC AGGCAACACT GGTCACCTTG
AGCGGTGACA GCATCGTCAG CAGATTGAAT GACAGCGACT CGTTCAAACA ACTCTTGTTG
AACGCGGATG GAGGTCAAGT TGCCAAACTG GCTTCGGAGT TGGCCCCGGA AGTCAGCGGT
GGGGCCAGAA GCGCCGCCAC CACCAGCCAG AGCCTGATCA GCAATGTGAC GGGCAGCCGC
ACCAGTTCTA TACGCGGTGC ATCCTCTGGC GAAGGCTTCA AAGATGCGGG TGTCTGGGTC
CAGTCACTCT ACAGCGACGC CACTCAAGAC CGGCGTGACG GCATTGCCGG CTACAACGCC
TACAGCAACG GAATCGCAGT AGGTGCTGAC GGCAAGGTCA ATGAAAACCT GACGCTGGGA
CTGGCCTACA GCTTCATCAA CACCGATGTG AATGGCAAAA GTGGCAACAA AACCAACGTT
GATAGCCATG CCTTTACGCT GTACGGCGGG TTTGAAAAGG GCAACTATTT CGTTGATACG
AGCCTGACTT ACGGCTTCAA CGACAACCAG AGCAAGCGCA GCATCGCAGG TACGCGTGCC
AAGGCCGATT ACGACAGTGA CCTGCTGGGT CTGAATCTGG TGGGCGGCTA CACCTACCAC
GTCAGCCCGC AAGTACTGAT CGAGCCACGT CTTGCCGCGC GTTACAGCCA GGTAAACATT
GATGGCTACC GCGAAAAAGG TTCTTCGGCT GCGCTGAAAG TAGAAGACCA GCGTTATGAG
GCGATTGAGT TGGGCGCAGG TATGCGTGTG GCTGGCAGTT TCAGCTTGGG TGCCGGCACG
CTGGAGCCGC AGGCCAAGCT GATGGCTTAC CATGACTTCG CCGCCGACGA GGCTCAGAGT
ACATCGACCT TTTTGCTCGG CAGCACGCCG TTCGTGACAA CTGGCGCCAA AGCGGTGCGT
GACAGCTACG AAGCCGGTGT AGGTGCCGAT TACAAACTGG GCGCAGTTAC ATTGGGCGTC
AACTACGACT ACATCGGAAA GTCCGGCTTC GATGCCGACG TGTTTTCGGC AAAAGTGCGT
TACGACTTCT GA
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| Protein sequence | MTAVIFRKTL LAMAVAATAI PAFAETVQLT NAGYNSERQA HTGNLEINGA YTGSTVKDAI
KLSGSTVDKD LIFNANINNS GNLAGGEEAK GVSLQGGRIV GSVINRRLID VTSTGATALD
VATSLAVFEN HGSITATGTG SKGLRIDGAT ITGSNAYITN AGTIRGDGAA IAIGTTRYSI
SNAQPWFIER GDFNIYNTGS IISADRAVDA SKSNRPVELI LRKGSVVVGN LIDLSNIELE
GDTSFAGTDS HTDGYNIRLK TGGEVYVGGT SSSPTTMTFE STHTSINGDL YVDGNSALGL
NLSNATDTKT AVLKVTGTTQ FEQGAQVKLA AKGDDFNANG TTYKLIEAGK IELLGKDGTA
VDSAGKLDVV STSALLKIDS YTVDGKNVVA VVTGKGREEV AQVVADNGGS VNEQATLVTL
SGDSIVSRLN DSDSFKQLLL NADGGQVAKL ASELAPEVSG GARSAATTSQ SLISNVTGSR
TSSIRGASSG EGFKDAGVWV QSLYSDATQD RRDGIAGYNA YSNGIAVGAD GKVNENLTLG
LAYSFINTDV NGKSGNKTNV DSHAFTLYGG FEKGNYFVDT SLTYGFNDNQ SKRSIAGTRA
KADYDSDLLG LNLVGGYTYH VSPQVLIEPR LAARYSQVNI DGYREKGSSA ALKVEDQRYE
AIELGAGMRV AGSFSLGAGT LEPQAKLMAY HDFAADEAQS TSTFLLGSTP FVTTGAKAVR
DSYEAGVGAD YKLGAVTLGV NYDYIGKSGF DADVFSAKVR YDF
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