| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2683 |
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| Symbol | |
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| ID | 3714358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 3085020 |
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| End bp | 3087971 |
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| Gene Length | 2952 bp |
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| Protein Length | 983 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_348414 |
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| Protein GI | 77458908 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.525643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000404465 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGTAC GCATCAAGCC GATTTCGGTC GGCACCCTGC TGCTTGTGAT TTCTGCAACC
CAGGCTCAGG CCCAATACCT CGAAACCGGC AAACCCGGCG ATCCCGCCAG TTGGCGCAGC
GCTGAATTTC TGCGGGACTG GGGCCTGGAC CGGATGCAGG CCGATCAGGC CTATGCCGCC
GGCATCACCG GCAAAGGCGT GAAAATCGGC GCGCTGGACT CCGGTTTCGA CGCCGCCCAT
CCCGAGTTCG CCCATGACCG TTATCACCCG GTACTGGCCA GCGGCAGTTA CATCGACGGC
TCGCTGTTCA ACGTCAATGG CACCCTCAAC CCGAACAACG ATTCCCACGG CACCCACGTG
GTCGGCACCA TGGGCGCGTC TCGCGATGGC ACCGGCATGC ATGGTGTCGC GTACAACGCG
CAGATCTACG TCGGCAACAC CAACAAGAAC GACAGTTTCC TGTTCGGCCC CAATCCTGAC
CCGCGCTACT TCAAAGCGGT GTACGACGCC CTGGCCGATG CCGGTGTGCG AGCGATCAAC
AACAGCTGGG GCAGCCAGCC GCCGGATGTC AGCTACCGAA CCCTCGCGGA TCTGCACGCC
GCGTACGCCC AGCACTGGAA CAAAGGCACC TGGCTGGATG CGGCGGCGGA GGTCTCCCGT
CGTGGCGTGA TCAACGTGTT CAGCGCCGGC AACAGCGGCT ACCCGAATGC CAGCGTGCGT
TCGGCGCTGC CGTACTTCCA GCCGGATCTG GAAGGCCATT GGCTGGCGGT TTCCGGACTC
GACCAAAGCA ATCAGCAGAA GTACAACCAG TGCGGCATCG CCAAATACTG GTGCATCACC
ACGCCCGGGG CGAAGATCGA CAGCACCATT CCCGACGGCG GTTACGCGAT CAAATCCGGC
ACCTCGATGG CCGCCCCGCA CGCCACCGGC GCACTGGCGT TGGTGATGGA GCGCTATCCG
TACATGAACA ACCAGCAGGC TCTCGAAGTG CTGCTGACCA CCGCCACTCA ACTCGACGGC
TCGGTGACCG ACGCGCCGAC CGAGCGAGTC GGCTGGGGCG TGGCCAACCT GTACCGGGCG
ATGCGCGGGC CGGGGCAGTT GCTCGGGGCG TTCGACGCCC ATCTGGCGGC CGGACAGAGC
GATGTCTGGA GCAATGACAT CAGCGACAAA GCACTGATCC AGCGCCAGAG CGAAGACCTT
GCCGAGCACA ACGCCTGGCA GCAAACCCTG CAGAACAGGG GCTGGCAGAA CGGCGTGCCG
GCCGGTGCCA GCCAGCAGGA TCAGACCGAT TACGCCGTGG GCATGGCTCG CGATGCAGCG
GCGGCCGGTC GGGTTTATCA AGGCAGTCTG ATCAAGTCCG GTGACGGTCG ACTGATTTTG
ACCGGTGAAA ACACTTATCG CGGGCCGACC ACGGTCAATG GCGGTCTGCT GACGGTGAAC
GGTTCGCTGA CCTCGACCGT GACCGTCAAT GACGGTGGTA CCCTCGGCGG CTCCGGACGG
ATCGGCGCAC TGACCGCCAA CAGCGGCGGC CGCGTGGCGC CGGGCAATTC CATCGGCACC
TTGAATGTCG CCGGTGACGT GACCTTCGCG TCGGGCTCGA CCTACGCCGT GGAGTTGTCT
CCCACCAGCA GCGACCGCAT CGTCGCCGGC GGTACCGCCT CCATCAACGG CGCCACCGTG
AGCCTGTCGC TGGAAAACAG CCCGACGTTG CTCAGCACCA CCGAGGCCAG AAGTCTGCTC
GGCCAGCAGT ACGACATTCT GCAAGCGGCA GGCGGCATTC AGGGCCGGTT CGGTGCGGTG
CTGCCGGATT ATCTGTTCAT CGGTGGCAGC CTGGCCTACA GCGACAACGG CATTGGTCTC
AATGTCGAGC GCAACGCAAC ATCCCTCGCC AGCGTCGGCC AGACCCCGAA TCAGCGCTCC
GTGGCCACTG CCGTCGAAGG TCTGGGCGCG GGCAGTTCGG TTTACGAAAG CCTGCTGTTG
TCGGCCACCG CCAGTGATGC GCAACAAGCC TTTCAACAGT TGAGCGGCGA AATCTACCCG
GCCCTTGGCT CAGTGCTGAT CAACGACAGC CGCCAACTGC GCGACGCCAT CGGCGAGCGC
CTGCACGATA CGCAAGCCAC GCAAAGCAAC GGCTGGATCA AGGCCCTTGG CGCCTGGGGC
ACAACCGACT CGCGCCACGA CACCGCCGGT TACAGCACCT CCATCGGTGG CTTGCTGGCC
GGTGTCGACG GCGCGGTCGA CGAGCAGACC CGCATCGGTC TGGTCACCGG TTACAGCGAC
AGCTCGCTGA GCATGGGGTC AGGCACGCAT TCCTCGGCCA AGGTCGACAG CTATCACCTC
GGCGCCTACG CCGGTCACGA GATTGGTGCC TGGCGCCTGA GCACCGGCGC GGCCTACAGC
TGGCATCGCG CCGATGTGAA ACGCGATTTG CAGTATGGCA ACGTCAGCGC CAAGCAGAAA
GCCAAAGTCG ATGCCGCCAC CACCCAGGTG TTCGGCGAAG CGGCTTATCG ACTGAACCTG
CAACCACTGG CTCTGGAGCC GTTCGCCAAC CTGGCCTACG TGCACCTCGA CACCGACGGT
TTCACCGAGA AGGGCGACGC CGCCGCGCTG AAAAGTGGTG ACGACCAGCG CGACGCGGTG
TTGAGCACCC TCGGCGTGCG GGCGATCAAG ACCTTCGACC TGCCGTCCGC ACAGAAGCTG
GAAGTGAGCG GACACCTGGG CTGGCAGCAC AGCCTGACCG ACATCGACTC CGAACAGCAT
TTGCGTTTCG CCAGCGGCAG CGCGCCGTAC ACAGTCGAAA GCTCGCCACT GGTGCGCGAC
GCTGCGCTGG TCGGCGTGCA GGCCAGTCTG GCACTGGCCC GCGACGTGCG GGTGAACCTC
GATTACACCG GACAACTGGC CAGCCGCGAG AAGCAGCACG GCGTGGGCCT GAGCCTGAAC
TGGCAGTTCT GA
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| Protein sequence | MDVRIKPISV GTLLLVISAT QAQAQYLETG KPGDPASWRS AEFLRDWGLD RMQADQAYAA
GITGKGVKIG ALDSGFDAAH PEFAHDRYHP VLASGSYIDG SLFNVNGTLN PNNDSHGTHV
VGTMGASRDG TGMHGVAYNA QIYVGNTNKN DSFLFGPNPD PRYFKAVYDA LADAGVRAIN
NSWGSQPPDV SYRTLADLHA AYAQHWNKGT WLDAAAEVSR RGVINVFSAG NSGYPNASVR
SALPYFQPDL EGHWLAVSGL DQSNQQKYNQ CGIAKYWCIT TPGAKIDSTI PDGGYAIKSG
TSMAAPHATG ALALVMERYP YMNNQQALEV LLTTATQLDG SVTDAPTERV GWGVANLYRA
MRGPGQLLGA FDAHLAAGQS DVWSNDISDK ALIQRQSEDL AEHNAWQQTL QNRGWQNGVP
AGASQQDQTD YAVGMARDAA AAGRVYQGSL IKSGDGRLIL TGENTYRGPT TVNGGLLTVN
GSLTSTVTVN DGGTLGGSGR IGALTANSGG RVAPGNSIGT LNVAGDVTFA SGSTYAVELS
PTSSDRIVAG GTASINGATV SLSLENSPTL LSTTEARSLL GQQYDILQAA GGIQGRFGAV
LPDYLFIGGS LAYSDNGIGL NVERNATSLA SVGQTPNQRS VATAVEGLGA GSSVYESLLL
SATASDAQQA FQQLSGEIYP ALGSVLINDS RQLRDAIGER LHDTQATQSN GWIKALGAWG
TTDSRHDTAG YSTSIGGLLA GVDGAVDEQT RIGLVTGYSD SSLSMGSGTH SSAKVDSYHL
GAYAGHEIGA WRLSTGAAYS WHRADVKRDL QYGNVSAKQK AKVDAATTQV FGEAAYRLNL
QPLALEPFAN LAYVHLDTDG FTEKGDAAAL KSGDDQRDAV LSTLGVRAIK TFDLPSAQKL
EVSGHLGWQH SLTDIDSEQH LRFASGSAPY TVESSPLVRD AALVGVQASL ALARDVRVNL
DYTGQLASRE KQHGVGLSLN WQF
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