19 homologs were found in PanDaTox collection
for query gene Svir_22190 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_22190  hypothetical protein  100 
 
 
267 aa  548  1e-155  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.138955  normal 
 
 
-
 
NC_009943  Dole_0368  methyltransferase type 11  48.07 
 
 
254 aa  222  6e-57  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00580902  n/a   
 
 
-
 
NC_007484  Noc_0154  hypothetical protein  38.4 
 
 
259 aa  206  5e-52  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011670  PHATRDRAFT_43435  predicted protein  30.07 
 
 
456 aa  52  0.00001  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_007802  Jann_2499  methyltransferase type 12  27.41 
 
 
203 aa  50.1  0.00004  Jannaschia sp. CCS1  Bacteria  normal  normal  0.301518 
 
 
-
 
NC_008312  Tery_2277  methyltransferase type 11  27.27 
 
 
215 aa  48.9  0.0001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4717  3-demethylubiquinone-9 3-methyltransferase  25.83 
 
 
240 aa  47.4  0.0002  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.970873 
 
 
-
 
NC_007404  Tbd_0946  3-demethylubiquinone-9 3-methyltransferase  26.55 
 
 
232 aa  47.4  0.0003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_013747  Htur_5135  Methyltransferase type 11  34.23 
 
 
275 aa  46.2  0.0006  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_007908  Rfer_2828  3-demethylubiquinone-9 3-methyltransferase  25.4 
 
 
252 aa  45.1  0.001  Rhodoferax ferrireducens T118  Bacteria  normal  0.0566454  n/a   
 
 
-
 
NC_007520  Tcr_1190  3-demethylubiquinone-9 3-methyltransferase  24.77 
 
 
241 aa  44.7  0.001  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1622  3-demethylubiquinone-9 3-methyltransferase  27.5 
 
 
242 aa  44.7  0.002  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0284  methyltransferase type 11  26.59 
 
 
209 aa  43.9  0.003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_2305  3-demethylubiquinone-9 3-methyltransferase  26.79 
 
 
256 aa  43.5  0.003  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.0000243395 
 
 
-
 
NC_009831  Ssed_2304  3-demethylubiquinone-9 3-methyltransferase  25.44 
 
 
241 aa  42.7  0.006  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.00000612438 
 
 
-
 
NC_009901  Spea_2066  3-demethylubiquinone-9 3-methyltransferase  26.36 
 
 
236 aa  42.7  0.006  Shewanella pealeana ATCC 700345  Bacteria  normal  0.10278  n/a   
 
 
-
 
NC_008340  Mlg_0910  3-demethylubiquinone-9 3-methyltransferase  28.18 
 
 
247 aa  42.7  0.007  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1751  putative methyltransferase  33.33 
 
 
222 aa  42.4  0.007  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0736  3-demethylubiquinone-9 3-methyltransferase  28.18 
 
 
232 aa  42.4  0.009  Burkholderia phymatum STM815  Bacteria  normal  0.421351  normal 
 
 
-
 
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